Pairwise Alignments

Query, 217 a.a., outer membrane protein W from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., outer membrane protein W (RefSeq) from Shewanella sp. ANA-3

 Score =  237 bits (604), Expect = 1e-67
 Identities = 117/214 (54%), Positives = 143/214 (66%), Gaps = 4/214 (1%)

Query: 4   TICGLAVLAALSSAPVFAHQEGDFIVRAGIASVVPNDSSDKVLNTQSELAVNSNTQLGLT 63
           T+    +LAA  SA V AHQ GD IVRAG  +V PN+SS  VL T  E +V+++TQLGL 
Sbjct: 9   TLIAATLLAAGFSASVSAHQAGDIIVRAGAVTVAPNESSANVL-TLGEFSVDNDTQLGLN 67

Query: 64  LGYMFTDNISFEVLAATPFSHKISTSGGELGSLGDIGETKHLPPTFMVQYYFGEANSTFR 123
            GYM TDN   E+LAATPFSH +S        +G+I ETK LPPT + QYYFG+A S  R
Sbjct: 68  FGYMLTDNFGIELLAATPFSHSVSLPAP---GVGEIAETKQLPPTLVAQYYFGDAQSKLR 124

Query: 124 PYVGAGLNYTTFFDESFNGTGTNAGLSDLKLDDSWGLAANVGFDYMLNDSWFLNASVWYA 183
           PYVG G+NYT FFD  FN  G + GLS+L +  SWGLAA VG DY +N +W +NASVWYA
Sbjct: 125 PYVGVGVNYTNFFDNDFNAHGKSLGLSNLSMSTSWGLAAQVGLDYQVNKNWLVNASVWYA 184

Query: 184 NIETTATYKAGADAKSTDVEINPWVFMIAGGYKF 217
            I T   + AG D    D +INPWV+M++ GY F
Sbjct: 185 QISTDVKFTAGTDQYVFDTDINPWVYMVSVGYTF 218