Pairwise Alignments

Query, 609 a.a., hemagglutinin/proteinase from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., endonuclease I (RefSeq) from Shewanella loihica PV-4

 Score = 92.8 bits (229), Expect = 3e-23
 Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 1/109 (0%)

Query: 501 SCGTTPPPVGKVLEKGKPITGLSGSRGGEDFYTFTVTNSGS-VVVSISGGTGDADLYVKA 559
           SC T+       L  G+P + L+ ++G    Y F +    S VVV++SGGTGDADLY++ 
Sbjct: 173 SCDTSAGGSDNQLGNGQPKSDLNAAKGLSLSYLFDLPQGASDVVVTMSGGTGDADLYLRQ 232

Query: 560 GSKPTTSSWDCRPYRSGNAEQCSISAVVGTTYHVMLRGYSNYSGVTLRL 608
           GS+PT S +DC PY +GN EQCS++  V   Y+V +  Y  +SGV+L L
Sbjct: 233 GSEPTLSEYDCAPYLTGNNEQCSVTTPVVGRYYVNINAYEAFSGVSLSL 281



 Score = 26.6 bits (57), Expect = 0.003
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 9/66 (13%)

Query: 192 GINHAQATGTGPGGNQKTG-RYEYGSNGLPGFTIDKTGTTCTMNNSAVKTVNLNGGTSGS 250
           G      +G+G GG+   G   +Y      G  I K+G        A    +LNG   G 
Sbjct: 293 GSGDGSGSGSGTGGDGSAGDNGDYVYTSYYGDAIGKSG--------AALKASLNGIIKGH 344

Query: 251 TAFSYA 256
           T FSY+
Sbjct: 345 TRFSYS 350