Pairwise Alignments

Query, 609 a.a., hemagglutinin/proteinase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., vibriolysin (RefSeq) from Shewanella sp. ANA-3

 Score =  431 bits (1108), Expect = e-125
 Identities = 239/468 (51%), Positives = 303/468 (64%), Gaps = 38/468 (8%)

Query: 54  FKAVNTVQLPNGKVKVRYQQMYNGVPVYGTVVVATESSKGISQVYGQMAQQLEADLPTVT 113
           FKA+ TV    G+ K +  Q +NGV VYG  +V +      S + G +AQ   AD  +V 
Sbjct: 45  FKAIKTVTFNKGQTKTKALQYFNGVLVYGHHLVVSNDDSEQSAI-GDVAQI--ADDFSVE 101

Query: 114 PDIESQQAIALAVSHFGEQHAGESLPVENESVQLMVRLDDNQQAQLVYLVDFFV-ASETP 172
             I   QAIA         + G S     + V+L++ + D+   +LVY V +    ++  
Sbjct: 102 AGISQGQAIAA----LNRLYPG-SAATGKKDVELVILMQDDTP-RLVYRVSYLSDQTDAL 155

Query: 173 SRPFYFISAETGEVLDQWDGINHAQAT-------------------GTGPGGNQKTGRYE 213
           SRP  F+ A+TGEVL+ W+ I  A+                      TGPGGN K G Y 
Sbjct: 156 SRPTGFVDAQTGEVLEHWNEIMTAKNNVGKPGSGGGGSGGSSNPFDATGPGGNAKIGDYY 215

Query: 214 YGSNGLPGFT-IDKTGTTCTMNNSAVKTVNLNGGTSGSTAFSYACNNSTNYNSVKTVNGA 272
           YGS+   GF  + ++  TCTM N+ VKTVN+   T   + F++ C      N+ +TVNGA
Sbjct: 216 YGSDY--GFLKVSESNGTCTMTNANVKTVNMANSTRRGSVFTFTCPE----NTYQTVNGA 269

Query: 273 YSPLNDAHFFGKVVFDMYQQWLNTSPLTFQLTMRVHYGNNYENAFWDGRAMTFGDGYTRF 332
           YSPLNDAH+FG V+F+MY+ W NT+PLTFQL MRVHYG NYENAFWDG AM+FGDG + F
Sbjct: 270 YSPLNDAHYFGGVIFNMYKDWYNTAPLTFQLEMRVHYGRNYENAFWDGSAMSFGDGASYF 329

Query: 333 YPLVDINVSAHEVSHGFTEQNSGLVYRDMSGGINEAFSDIAGEAAEYFMRGNVDWIVGAD 392
           YPLV ++VSAHEVSHGFTEQNSGL Y   SGGINEAFSDIAGEAAE++MRG+ DW VG D
Sbjct: 330 YPLVSLDVSAHEVSHGFTEQNSGLNYSGQSGGINEAFSDIAGEAAEFYMRGSNDWKVGYD 389

Query: 393 IFKSSGGLRYFDQPSRDGRSIDHASQYYSGIDVHHSSGVFNRAFYLLANKSGWNVRKGFE 452
           I K +G LRY D P++DGRSID+A+ Y S +DVH+SSGVFN+AFY LA K+GW+ RK F+
Sbjct: 390 IVKGNGALRYMDNPTKDGRSIDNAANYTSSMDVHYSSGVFNKAFYTLATKNGWDTRKAFD 449

Query: 453 VFAVANQLYWTPNSTFDQGGCGVVKA--AQDLNYNTADVVAAFNTVGV 498
           VF +ANQLYWTP STF++  CGV +A  A+   Y  ADV AAF  VGV
Sbjct: 450 VFVLANQLYWTPTSTFNKAACGVQQAASAKGSGYPVADVAAAFLAVGV 497