Pairwise Alignments

Query, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  293 bits (751), Expect = 6e-84
 Identities = 171/410 (41%), Positives = 252/410 (61%), Gaps = 5/410 (1%)

Query: 19  IVQSLSEHIASIEFDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAECQSQQYQ-Q 77
           + +SL   +  +  D  G + S N  FL+ + Y+ ++L G+       P   ++ ++Q +
Sbjct: 38  VKESLDREMLGLTLDADGRIQSVNQNFLDEMRYKSQDLIGRAVDELV-PGYLKTNEFQVR 96

Query: 78  FWTSLAQGKSHSGTFMRYKKDGSLLVLEATYFPIK-TDGKVSSVMKIASDVTEQYLHAES 136
           F ++L +G+  SG     + +G    L +   P++  DG+V      ++D+T     +  
Sbjct: 97  FKSALTRGEHFSGAVRLLRGNGQEAWLRSILQPVQGADGRVRFFSMYSNDLTRTIEASRE 156

Query: 137 QRDLLTALNQNFAVIEFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLFCFDEFYQQ--H 194
             +L+ AL ++ AVIEF+  G +++AN  FL  MGYSL QIKGKHHR+FC  E Y    +
Sbjct: 157 HENLIGALVRSTAVIEFDLGGHVLTANDRFLNAMGYSLAQIKGKHHRMFCEPEEYNSAAY 216

Query: 195 PTFWKSLAAGQAYSGRFLRKNSYGSQVWIQASYSPVKDQNNKVYKIVKFASDITAEVLRE 254
             FWK L +G+  +GRF R +S G +VW++ASY+PV D N ++YK+VKFA++IT +V +E
Sbjct: 217 EQFWKRLNSGEFVAGRFKRIDSSGREVWLEASYNPVLDANERLYKVVKFATNITDQVNQE 276

Query: 255 QQVTDAANIAYSTSVETSQVAQGGNHVLQDSVRLAEKMVGNIEQSLQQIEQLVVLSKDVS 314
           + V +AANIAYSTS++T   AQ G  V+  +V +   +  +++ + + IE L   S  + 
Sbjct: 277 KAVAEAANIAYSTSLQTDNSAQRGTTVVTQAVDVMRDLARHMQTAGEGIEALNEQSLVIG 336

Query: 315 EIVKTISGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSKATEEINQVVN 374
            IVKTISGIA+QTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTS+AT+EI  VV 
Sbjct: 337 TIVKTISGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSQATDEIVGVVR 396

Query: 375 KNLSLTEAVTSSISQVSQIANETNGRIVEVSTIMEQIYQGAENVSSAVSQ 424
           +N  +     + ++     A        E  T++ +I  GA+ V  AVSQ
Sbjct: 397 QNQDMARNAVALMTDGQHQAEHGLALAAEAGTVIVEIQDGAKKVVDAVSQ 446



 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 1/115 (0%)

Query: 17  DNIVQSLSEHIASIEFDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAECQSQQYQ 76
           +N++ +L    A IEFD  G+V++AN  FLNA+GY L ++ GKHHR+FC P E  S  Y+
Sbjct: 158 ENLIGALVRSTAVIEFDLGGHVLTANDRFLNAMGYSLAQIKGKHHRMFCEPEEYNSAAYE 217

Query: 77  QFWTSLAQGKSHSGTFMRYKKDGSLLVLEATYFPI-KTDGKVSSVMKIASDVTEQ 130
           QFW  L  G+  +G F R    G  + LEA+Y P+   + ++  V+K A+++T+Q
Sbjct: 218 QFWKRLNSGEFVAGRFKRIDSSGREVWLEASYNPVLDANERLYKVVKFATNITDQ 272