Pairwise Alignments

Query, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  120 bits (302), Expect = 1e-31
 Identities = 71/193 (36%), Positives = 109/193 (56%), Gaps = 3/193 (1%)

Query: 233 QNNKVYKIVKFASDITAEVLREQQVTDAANIAYSTSVETSQVAQGGNHVLQDSVRLAEKM 292
           Q  +  ++    +++TA V    Q T+ A +A     E +  ++ G  ++  +    + +
Sbjct: 427 QQAETEQVATAINEMTASVADVAQNTEGAALAAD---EANTASRNGLRIMHQAHSTIQAL 483

Query: 293 VGNIEQSLQQIEQLVVLSKDVSEIVKTISGIADQTNLLALNAAIEAARAGEQGRGFAVVA 352
              +E S Q+++ L + S+ +  +++ IS IADQTNLLALNAAIEAARAGEQGRGFAVVA
Sbjct: 484 AEEVELSAQKVQALALHSQSIGGVIQVISTIADQTNLLALNAAIEAARAGEQGRGFAVVA 543

Query: 353 DEVRQLASRTSKATEEINQVVNKNLSLTEAVTSSISQVSQIANETNGRIVEVSTIMEQIY 412
           DEVR LASRT  +TEEI  ++ +  S T+A    +    Q A+       + S  +  I 
Sbjct: 544 DEVRTLASRTQASTEEIRGIIQQLQSATDAAVQQMQAGQQKAHACISAASDASGSLSSIS 603

Query: 413 QGAENVSSAVSQL 425
           QG E +    +Q+
Sbjct: 604 QGVERIVEMNTQI 616