Pairwise Alignments

Query, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  114 bits (285), Expect = 7e-30
 Identities = 73/196 (37%), Positives = 114/196 (58%), Gaps = 16/196 (8%)

Query: 233 QNNKVYKIVKFASDITA---EVLREQQVTDAANIAYSTSVETSQVAQGGNHVLQDSVRLA 289
           QN+++ +     + +T+   EV R    T  A+ + +TS      A  G  ++Q++V   
Sbjct: 294 QNDEIEQAATAVNQMTSAVEEVARNATSTSQASRSAATS------AGDGRDLVQETVSAI 347

Query: 290 EKMVGNIEQSLQQIEQLVVLSKDVSEIVKTISGIADQTNLLALNAAIEAARAGEQGRGFA 349
           E+M G+++ + + I  L   S+D+ +++  I G+ADQTNLLALNAAIEAARAGE GRGFA
Sbjct: 348 ERMSGDVQGTAELIISLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFA 407

Query: 350 VVADEVRQLASRTSKATEEINQVVNKNLSLTEAVTSSISQVSQIANETNGRIVEVSTIME 409
           VVADEVR LA RT ++T EI ++++   + TE   SS+   ++ A  T         I +
Sbjct: 408 VVADEVRALAHRTQQSTSEIERMISSIQTGTEQAVSSMRNSTERAEST-------LNIAK 460

Query: 410 QIYQGAENVSSAVSQL 425
              Q    ++SAV ++
Sbjct: 461 GAGQALNTINSAVEEI 476



 Score = 31.6 bits (70), Expect = 6e-05
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 3/90 (3%)

Query: 319 TISGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSKATEEINQVVNKNLS 378
           T+ GI+     LA  A    A   E  RG     DE+ Q A+  ++ T  + +V     S
Sbjct: 262 TLQGISGSATQLASAAEELNAVTDESARGLVQQNDEIEQAATAVNQMTSAVEEVARNATS 321

Query: 379 LTEAVTSSISQVS---QIANETNGRIVEVS 405
            ++A  S+ +       +  ET   I  +S
Sbjct: 322 TSQASRSAATSAGDGRDLVQETVSAIERMS 351