Pairwise Alignments

Query, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  115 bits (288), Expect = 3e-30
 Identities = 71/199 (35%), Positives = 119/199 (59%), Gaps = 10/199 (5%)

Query: 233 QNNKVYKIVKFASDITAEVLREQQVTDAANIAYSTSVETSQVAQGGNHVLQDSVRLAEKM 292
           Q N++       ++++A V  E+  ++AA+ +  TS ++S  A  G   + ++V     M
Sbjct: 295 QTNEIEMAATAVNEMSAAV--EEVASNAASASEVTS-QSSTAAMAGRAQVDETVTAINLM 351

Query: 293 VGNIEQSLQQIEQLVVLSKDVSEIVKTISGIADQTNLLALNAAIEAARAGEQGRGFAVVA 352
           V  ++ +  +++ L V++ D+S+++  I  IA+QTNLLALNAAIEAARAGE GRGFAVVA
Sbjct: 352 VSKVQITSTEVQGLAVMATDISKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVA 411

Query: 353 DEVRQLASRTSKATEEINQVVNKNLSLTEAVTSSISQVS-------QIANETNGRIVEVS 405
           DEVR LA RT ++T EI Q+V+   + T    S++ Q S       ++AN     ++E++
Sbjct: 412 DEVRALAHRTQQSTREIEQMVDSIQTGTGNAVSAMEQTSVQAHKTLEMANGAGKALLEIT 471

Query: 406 TIMEQIYQGAENVSSAVSQ 424
             + QI +    +++A  +
Sbjct: 472 ESISQINERNLMIATAAEE 490