Pairwise Alignments

Query, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score =  290 bits (741), Expect = 8e-83
 Identities = 168/407 (41%), Positives = 240/407 (58%), Gaps = 3/407 (0%)

Query: 21  QSLSEHIASIEFDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAECQSQQYQQFWT 80
           Q L+    ++  D +G + + N LF   + Y   EL G+       P        ++  T
Sbjct: 40  QILNLETVAVVLDGTGKIQTVNALFETEMSYAQAELVGRSLSELSPPELSGDVHQKRALT 99

Query: 81  SLAQGKSHSGTFMRYKKDGSLLVLEATYFPIKTD-GKVSSVMKIASDVTEQYLHAESQRD 139
           ++  GK  SGT     K GS + L     P K + G V  +   +S +T     +     
Sbjct: 100 AIRDGKHFSGTLRLVSKTGSRVWLRTIVVPYKNETGGVEQITLYSSVLTRTIEASRENEA 159

Query: 140 LLTALNQNFAVIEFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLFCFDE--FYQQHPTF 197
           L+ AL ++ AVI+F  DGT+ISAN  FL+ MGY L+QIKGKHH++FC  E      +  F
Sbjct: 160 LVNALQRSTAVIDFTLDGTVISANDNFLRAMGYELNQIKGKHHKMFCVPEESASDAYTQF 219

Query: 198 WKSLAAGQAYSGRFLRKNSYGSQVWIQASYSPVKDQNNKVYKIVKFASDITAEVLREQQV 257
           W+ L  G+    RF R +  G  VW++ASY+P+ D N K+YKI KFA+ IT +V RE+ V
Sbjct: 220 WERLRRGEFIVDRFRRIDKGGRDVWLEASYNPITDANGKLYKIAKFATVITEQVEREKAV 279

Query: 258 TDAANIAYSTSVETSQVAQGGNHVLQDSVRLAEKMVGNIEQSLQQIEQLVVLSKDVSEIV 317
            +A+ +AY TS++T   AQ G  V++D++++  ++  ++E++ + IE L   S+ +  I+
Sbjct: 280 AEASEMAYQTSIDTDSSAQQGRKVIKDTLQMLGQLTISMEEATRGIEALDSQSQVIGTII 339

Query: 318 KTISGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSKATEEINQVVNKNL 377
           KTISGIA+QTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRT+KA EEI  VV  N 
Sbjct: 340 KTISGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTTKAAEEIVNVVKTNQ 399

Query: 378 SLTEAVTSSISQVSQIANETNGRIVEVSTIMEQIYQGAENVSSAVSQ 424
           SL       I + ++ A+E      +   ++++I  GA  V  AVS+
Sbjct: 400 SLASDAVGVIVRSTEQASEALVLANDADRVIQEIQHGANTVVRAVSR 446



 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 1/113 (0%)

Query: 19  IVQSLSEHIASIEFDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAECQSQQYQQF 78
           +V +L    A I+F   G VISAN  FL A+GY L ++ GKHH++FC P E  S  Y QF
Sbjct: 160 LVNALQRSTAVIDFTLDGTVISANDNFLRAMGYELNQIKGKHHKMFCVPEESASDAYTQF 219

Query: 79  WTSLAQGKSHSGTFMRYKKDGSLLVLEATYFPI-KTDGKVSSVMKIASDVTEQ 130
           W  L +G+     F R  K G  + LEA+Y PI   +GK+  + K A+ +TEQ
Sbjct: 220 WERLRRGEFIVDRFRRIDKGGRDVWLEASYNPITDANGKLYKIAKFATVITEQ 272