Pairwise Alignments
Query, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056
Subject, 710 a.a., PAS from Pseudomonas syringae pv. syringae B728a
Score = 283 bits (725), Expect = 9e-81
Identities = 168/429 (39%), Positives = 256/429 (59%), Gaps = 29/429 (6%)
Query: 20 VQSLSEHIASIEFDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAECQSQQYQQFW 79
V ++ A IEFD +G V+ AN FL GY L+E+ G+HHR+FCS S QY++ W
Sbjct: 267 VTAIERSQAVIEFDLTGKVLHANRNFLAVFGYDLDEIVGEHHRMFCSEEFVSSLQYRELW 326
Query: 80 TSLAQGKSHSGTFMRYKKDGSLLVLEATYFPI-KTDGKVSSVMKIASDVTEQYLHAESQR 138
L +G+ + + R +KDG + ++ATY PI GK ++K A DVT + +
Sbjct: 327 EKLGRGEYDANEYKRKRKDGKEIWIQATYNPIFDAQGKPYKIVKFALDVTVAKETSVEDQ 386
Query: 139 DLLTALNQNFAVIEFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLFCFDEFYQ--QHPT 196
+ A+++ AVIEF+ G II+AN+ FLK +GY L +IKGKHHR+FC +E+ + ++
Sbjct: 387 GKVNAIDRAQAVIEFDMAGNIITANANFLKALGYGLLEIKGKHHRIFCEEEYVRGTEYRE 446
Query: 197 FWKSLAAGQAYSGRFLRKNSYGSQVWIQASYSPVKDQNNKVYKIVKFASDITAEVLREQQ 256
FW L G+ YSGRF+R + YG ++WIQA+YSP+ D + +K+VKFA+DIT +V EQ
Sbjct: 447 FWHGLGQGEFYSGRFMRVSKYGQKIWIQATYSPIFDHDGLPFKVVKFATDITRQVEMEQA 506
Query: 257 VTDAANIAYSTSVET-----SQVAQGGNHVLQDSVRLAEKMVGNIEQSLQQIEQLVVL-- 309
+ +A A SV+ S VAQ D R+ + + Q+L + + +
Sbjct: 507 I-EAKTRAMGESVKALMNAISYVAQS-TETATDLARMTREQARSGSQTLVKASDAMGMIA 564
Query: 310 --SKDVSEIVKTISGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSKATE 367
++ + +I++ IS IA QTN+LA NAAIEAARAGE G GF+VVADEVR+LA ++S+AT+
Sbjct: 565 KSAEGIQDIIQVISEIASQTNMLAFNAAIEAARAGEHGLGFSVVADEVRKLAEKSSRATK 624
Query: 368 EINQVVNKNLSLTEAVTSSISQVSQIANETNGRIVE-----------VSTIMEQIYQGAE 416
EIN+++ + +S E S +++S+ A E IVE ++T E+ A+
Sbjct: 625 EINKLILETVSRIE----SGNEISRSAGEAFEHIVEGVMQTTQAIDGINTATEKQRLSAQ 680
Query: 417 NVSSAVSQL 425
V + + +L
Sbjct: 681 EVETLIVEL 689
Score = 197 bits (501), Expect = 9e-55
Identities = 97/259 (37%), Positives = 155/259 (59%), Gaps = 8/259 (3%)
Query: 18 NIVQSLSEHIASIEFDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAECQSQQYQQ 77
+++ ++ A IEFD GN++ AN FL+ VGYRL+E+ G+HHR+FC+P S +Y
Sbjct: 21 SLMTAIDRSQAMIEFDLDGNILRANTNFLDCVGYRLDEVQGRHHRMFCTPEHASSVEYVT 80
Query: 78 FWTSLAQGKSHSGTFMRYKKDGSLLVLEATYFPI-KTDGKVSSVMKIASDVTEQYLHAES 136
FW L +G G + R K+G + L+ATY P+ G V+K A+DVT Q
Sbjct: 81 FWEKLGKGAFDEGQYKRLGKNGREIWLQATYNPVFDEQGNPFKVVKFATDVTAQRKSNAE 140
Query: 137 QRDLLTALNQNFAVIEFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLFCFDEFYQQ--H 194
+ A++++ +IEF+ +G +++AN FLK +GY LD+I+G+HHR+FC D++ +
Sbjct: 141 YEGKVAAIDRSQGIIEFDLNGRVLNANENFLKVLGYRLDEIQGQHHRMFCEDDYLNSPAY 200
Query: 195 PTFWKSLAAGQAYSGRFLRKNSYGSQVWIQASYSPVKDQNNKVYKIVKFASDITAEVLRE 254
FW L G+ SG + R G ++WI A+Y+P+ D + + YK+VKFA+D+T E
Sbjct: 201 RAFWAKLERGEYDSGEYKRIGKNGRELWISATYNPIFDPDGRPYKVVKFANDVT-----E 255
Query: 255 QQVTDAANIAYSTSVETSQ 273
++ A + T++E SQ
Sbjct: 256 SRIRQAESAGKVTAIERSQ 274
Score = 195 bits (496), Expect = 3e-54
Identities = 100/237 (42%), Positives = 142/237 (59%), Gaps = 5/237 (2%)
Query: 30 IEFDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAECQSQQYQQFWTSLAQGKSHS 89
IEFD +G V++AN FL +GYRL+E+ G+HHR+FC S Y+ FW L +G+ S
Sbjct: 155 IEFDLNGRVLNANENFLKVLGYRLDEIQGQHHRMFCEDDYLNSPAYRAFWAKLERGEYDS 214
Query: 90 GTFMRYKKDGSLLVLEATYFPI-KTDGKVSSVMKIASDVTEQYLHAESQRDLLTALNQNF 148
G + R K+G L + ATY PI DG+ V+K A+DVTE + +TA+ ++
Sbjct: 215 GEYKRIGKNGRELWISATYNPIFDPDGRPYKVVKFANDVTESRIRQAESAGKVTAIERSQ 274
Query: 149 AVIEFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLFCFDEFYQ--QHPTFWKSLAAGQA 206
AVIEF+ G ++ AN FL GY LD+I G+HHR+FC +EF Q+ W+ L G+
Sbjct: 275 AVIEFDLTGKVLHANRNFLAVFGYDLDEIVGEHHRMFCSEEFVSSLQYRELWEKLGRGEY 334
Query: 207 YSGRFLRKNSYGSQVWIQASYSPVKDQNNKVYKIVKFASDITAEVLREQQVTDAANI 263
+ + RK G ++WIQA+Y+P+ D K YKIVKFA D+T V +E V D +
Sbjct: 335 DANEYKRKRKDGKEIWIQATYNPIFDAQGKPYKIVKFALDVT--VAKETSVEDQGKV 389