Pairwise Alignments

Query, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  117 bits (292), Expect = 1e-30
 Identities = 75/196 (38%), Positives = 120/196 (61%), Gaps = 10/196 (5%)

Query: 230 VKDQNNKVYKIVKFASDITAEVLREQQVTDAANIAYSTSVETSQVAQGGNHVLQDSVRLA 289
           ++ QNN++ +     +++T+ V  E+   +A + A S+S  TS  AQ G  +++ +V   
Sbjct: 300 IQRQNNEIDQAATAVNEMTSAV--EEVARNAEHTARSSSNATS-AAQDGLGLVKKTVTSI 356

Query: 290 EKMVGNIEQSLQQIEQLVVLSKDVSEIVKTISGIADQTNLLALNAAIEAARAGEQGRGFA 349
             M  +++++   I +L   S+D+ +++  I G+A+QTNLLALNAAIEAARAGE GRGFA
Sbjct: 357 NTMSTDVQKTATLIGELAGQSRDIGKVLDVIRGLAEQTNLLALNAAIEAARAGEAGRGFA 416

Query: 350 VVADEVRQLASRTSKATEEINQVVNKNLSLTEAVTSSISQVSQIANETNGRIVEVSTIME 409
           VVADEVR LA RT ++T EI ++V    + TE    S+   +++A+ET G       I E
Sbjct: 417 VVADEVRALAHRTQQSTSEIERLVTNIQNGTERAVGSMRGNTELASETLG-------IAE 469

Query: 410 QIYQGAENVSSAVSQL 425
              +    +S+AVS++
Sbjct: 470 GANESLTVISAAVSEI 485



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 2/111 (1%)

Query: 313 VSEIVKTIS--GIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSKATEEIN 370
           V+ I +TI+   ++   N+ A + +  AA              ++   A++ + A EE+ 
Sbjct: 231 VATITRTIARGDLSSTINISANDTSSVAAAVVAMQTQLRDTLQQISSSATQLAAAAEEMT 290

Query: 371 QVVNKNLSLTEAVTSSISQVSQIANETNGRIVEVSTIMEQIYQGAENVSSA 421
            +    +   +   + I Q +   NE    + EV+   E   + + N +SA
Sbjct: 291 AITEDGVQGIQRQNNEIDQAATAVNEMTSAVEEVARNAEHTARSSSNATSA 341



 Score = 28.5 bits (62), Expect = 5e-04
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 19/119 (15%)

Query: 263 IAYSTSVETSQVAQGGNHVLQDSVRLAEKMVGNIEQSLQQI-------EQLVVLSKDVSE 315
           +A+ T   TS++ +   ++   + R    M GN E + + +       E L V+S  VSE
Sbjct: 425 LAHRTQQSTSEIERLVTNIQNGTERAVGSMRGNTELASETLGIAEGANESLTVISAAVSE 484

Query: 316 IVKTISGIADQTNLLALNAAIEAAR-AGEQGRGFAVVADEVRQLAS---RTSKATEEIN 370
           I        +  NL+  +AA + A  A E  R    + D   Q +S   +T+ A+ E++
Sbjct: 485 I--------NDLNLVIASAAQQQAHVAREVDRNLMNIRDLSAQSSSGAQQTASASRELS 535



 Score = 25.0 bits (53), Expect = 0.006
 Identities = 43/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)

Query: 224 QASYSPVKDQNNKVYKIVKFASDIT-AEVLREQQVTDAANIAYSTSV-ETSQVAQGGNHV 281
           +A++S + +   ++ K      D+T  + L+   V     + + TSV +T  +A   N  
Sbjct: 95  EAAFSKLDELTVQLSKNTAETLDVTLTQQLQRGYVKLRDGMRHQTSVIQTGDIAAATNIN 154

Query: 282 LQDSVRLAEKMVGNIEQSLQQIEQLVVLSKDVSEIVKTISGIADQTNLLALNAAIEAARA 341
             +    AE++   ++   +Q +Q      D  E        A Q N L++ A +  A  
Sbjct: 155 RTEVKPFAEQVFKTLQTLREQGKQRAGERFDAQE------SSATQANNLSIAATLTIAIL 208

Query: 342 GEQGRGFAVVADEVRQLASRTSKATEEINQVVNKNLSLTEAVTSSISQVSQIANETNGRI 401
           G        V   +  + S  S    E + V     ++     SS   +S  AN+T+   
Sbjct: 209 G--------VIVTLMTIRSILSAIGGEPSTVATITRTIARGDLSSTINIS--ANDTSSVA 258

Query: 402 VEVSTIMEQIYQGAENVSSAVSQL 425
             V  +  Q+    + +SS+ +QL
Sbjct: 259 AAVVAMQTQLRDTLQQISSSATQL 282