Pairwise Alignments

Query, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., chemoreceptor methyl-accepting chemotaxis protein from Sinorhizobium meliloti 1021

 Score =  254 bits (648), Expect = 7e-72
 Identities = 156/494 (31%), Positives = 254/494 (51%), Gaps = 92/494 (18%)

Query: 11  TKPSHQDNIVQSLSEHIASIEFDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAEC 70
           T+      I+ +LS+  A I+FD +GNV+ AN  F  A+GY L+E+ G+HHRIFC+P   
Sbjct: 5   TRSRDARQIIDALSKSQAIIQFDLAGNVLDANENFCKALGYSLQEIVGQHHRIFCAPEFV 64

Query: 71  QSQQYQQFWTSLAQGKSHSGTFMRYKKDGSLLVLEATYFPIKTDGKVSSVMKIASDVTEQ 130
            +++Y++FW  L +G+  S ++ R  K G  + ++A+Y P+  +GK   V+K A+D+T  
Sbjct: 65  ATEEYREFWARLGRGELDSNSYRRLAKGGREIWIQASYNPVFRNGKPCKVVKFATDITAA 124

Query: 131 YLHAESQRDLLTALNQNFAVIEFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLFCFDEF 190
            + A      L A++++ A+IEF P G +++AN  F  T+GY L +I+G+HH +FC   +
Sbjct: 125 KMKATEDAGKLDAISRSQAMIEFSPAGEVMTANENFCNTLGYQLSEIQGRHHSMFCEPGY 184

Query: 191 --YQQHPTFWKSLAAGQAYSGRFLRKNSYGSQVWIQASYSPVKDQNNKVYKIVKFASDIT 248
               ++  FW+ LA G+  +  F+R    G +VWIQA+Y+P++D N +VYK+VKFA+D+T
Sbjct: 185 TGTAEYADFWRRLAQGEFIANEFVRYGKGGKEVWIQAAYNPIRDPNGRVYKVVKFATDVT 244

Query: 249 AEV------------LREQQVTDAANIAYSTSVE-----------------------TSQ 273
             +            L E  +  + +  +  S+E                        S 
Sbjct: 245 ERMAAINSLGAGLRALAEGDLAQSIDTPFVPSMEMVRKDFNEALVRLCRAMQTVGENASA 304

Query: 274 VAQGGNHVLQDSVRLA---EKMVGNIEQSLQQIEQ-----------------LVVLSKDV 313
           +A G   +   +  L+   E+   ++E++   +++                 LV  +KD 
Sbjct: 305 IAGGAREIRSAADALSKRTEQQAASVEETAAALDEITTTVADSSRRAEEAGNLVAKTKDG 364

Query: 314 SE-------------------------IVKTISGIADQTNLLALNAAIEAARAGEQGRGF 348
           +E                         I+  I  IA QTNLLALNA +EAARAGE G+GF
Sbjct: 365 AERSGLVVKSAIGAMGQIEQSSREISNIIGVIDDIAFQTNLLALNAGVEAARAGEAGKGF 424

Query: 349 AVVADEVRQLASRTSKATEEINQVVNKNLSLTEAVTSSISQVSQIANETNGRIVEVSTIM 408
           AVVA EVR+LA R++ A ++I  ++  +    E V + +S V Q           + TI+
Sbjct: 425 AVVAQEVRELAQRSASAAKDIKTLITAS---GEHVRNGVSLVGQTG-------TALETIL 474

Query: 409 EQIYQGAENVSSAV 422
            Q+ +   NVS+ V
Sbjct: 475 AQVQEINHNVSAIV 488



 Score =  102 bits (254), Expect = 3e-26
 Identities = 50/125 (40%), Positives = 79/125 (63%), Gaps = 3/125 (2%)

Query: 131 YLHAESQRDLLTALNQNFAVIEFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLFCFDEF 190
           +  +   R ++ AL+++ A+I+F+  G ++ AN  F K +GYSL +I G+HHR+FC  EF
Sbjct: 4   FTRSRDARQIIDALSKSQAIIQFDLAGNVLDANENFCKALGYSLQEIVGQHHRIFCAPEF 63

Query: 191 Y--QQHPTFWKSLAAGQAYSGRFLRKNSYGSQVWIQASYSPVKDQNNKVYKIVKFASDIT 248
              +++  FW  L  G+  S  + R    G ++WIQASY+PV  +N K  K+VKFA+DIT
Sbjct: 64  VATEEYREFWARLGRGELDSNSYRRLAKGGREIWIQASYNPV-FRNGKPCKVVKFATDIT 122

Query: 249 AEVLR 253
           A  ++
Sbjct: 123 AAKMK 127