Pairwise Alignments

Query, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., chemoreceptor McpA from Phaeobacter inhibens DSM 17395

 Score =  169 bits (428), Expect = 2e-46
 Identities = 125/392 (31%), Positives = 190/392 (48%), Gaps = 95/392 (24%)

Query: 126 DVTEQYLHAESQRDLLTALNQNFAVIEFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLF 185
           D  +Q   +  +R ++  +++  A+I+FEPDGTI+ AN+ FL  +GY L++I+GKHH +F
Sbjct: 6   DAKKQQAESTMERSIMDMIDRTQAMIQFEPDGTILEANANFLGAVGYQLEEIQGKHHSMF 65

Query: 186 CFDEFYQQ--HPTFWKSLAAGQAYSGRFLRKNSYGSQVWIQASYSPVKDQNNKVYKIVKF 243
              ++ +   + +FW  LAAG+ ++ ++ R +  G  +WIQA+Y+PV D   K  +++K 
Sbjct: 66  VDPDYARSDAYKSFWADLAAGKFFTDQYPRVSKAGETIWIQATYAPVLDSEGKTVRVIKL 125

Query: 244 ASDITA------------EVLRE---------------------------------QQVT 258
           A+DITA            E L E                                 + V 
Sbjct: 126 ATDITARQNSVEDISKGLEALSEGDLSYRVQPSDLPDMRVLCEAFNNAQDTLNGAVETVK 185

Query: 259 DAANIAYSTSVETSQVAQGGNHVLQDSVRLAEKMVGNIEQ----------SLQQIEQLV- 307
             A+   ST+ E SQ +   +H  +      E+    IE+            +++E +V 
Sbjct: 186 AVADAVGSTASEISQSSSELSHRTETQAATLEETAAAIEELTSTVRSAADGAREVEDIVS 245

Query: 308 -----------VLSKDV-------------SEIVKTISGIADQTNLLALNAAIEAARAGE 343
                      V+S  V             S+I+  I  IA QTNLLALNA +EAARAGE
Sbjct: 246 NARATAEESGEVVSNAVTAMSQIEESSGKISQIISVIDDIAFQTNLLALNAGVEAARAGE 305

Query: 344 QGRGFAVVADEVRQLASRTSKATEEINQVVNKNLSLTEAVTSSISQVSQIANETNGRIVE 403
            GRGFAVVA EVR LA R+S A  EI Q++N++   ++ V + +  VS+   E    I  
Sbjct: 306 AGRGFAVVASEVRALAQRSSDAAGEIKQLINES---SQYVGNGVKLVSRAGEELQKIIGS 362

Query: 404 VSTI---MEQIYQGAE-------NVSSAVSQL 425
           VSTI   + QI  GA         +++ VSQL
Sbjct: 363 VSTISGHVSQIATGAAEQSVTLVEINTGVSQL 394