Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., Long-chain fatty acid transport protein from Pseudomonas fluorescens FW300-N1B4

 Score =  152 bits (385), Expect = 1e-41
 Identities = 115/405 (28%), Positives = 190/405 (46%), Gaps = 30/405 (7%)

Query: 3   YKSSLAVAISALIAGQVSAAGFQVAEHSASGLGRAFSGEAAVADNASVLARNPAAMMLFE 62
           + S++A+  ++ IA   SA G  + E SAS  G A++G ++ A +AS +  NPA +   +
Sbjct: 23  FTSAMALLSASSIA---SANGIALNEQSASSAGTAYAGRSSSALDASTIYGNPAGLTKLK 79

Query: 63  TAQFSGALSIVDPEVNVDDLSNNQSMK------DVAPLQIVPAAYYIRPINDQWAWGLAM 116
            ++ SG  +IV      DD+S+ QS        D  PL +VP AY   P++++ + GL +
Sbjct: 80  RSEISGGAAIVSVS---DDISDAQSSAAGTNKGDSVPLGVVPFAYMSTPLDERLSVGLGL 136

Query: 117 FTTYGVATDYPNEIYAGDLAGDTSLISVNLNPNIAYRVNPELSLGFGLDLVAAKAKLTRH 176
           +   G+  DY            ++   + L P IAYR+N  +S+G G  L    AKL  +
Sbjct: 137 YAPSGLINDYEGSFQGRYHGSYSTTKEITLQPTIAYRINDYVSIGGGPTLNRFNAKLQNY 196

Query: 177 --KGGLAPFMGGGNPSDNLIGMTGETLALGWNIGALYELDEQNRIGFGYRSRVKLNFD-D 233
              G L       N  D L+ + G+  A+G+N+G L + +E  R G  Y S+V    +  
Sbjct: 197 MATGAL------NNGQDTLVTIKGDDTAIGYNVGLLVDFNEATRWGITYHSKVNYQLEGH 250

Query: 234 GEFSSYDSGIATSAVVPGQLKIELPAIWELSGFHQLNEQWAVHYSYQQTDWSSFEELTA- 292
            E S   S I        ++ + +P   + S  H+ N +W  +     T WS  +++ A 
Sbjct: 251 TEVSGSPSVIPLDGKYDTKIDLTMPESVDTSITHRFNSRWTGYLGTTWTRWSRIQKIEAI 310

Query: 293 ---TSSQCKNGTCFQKIEQYQDNGRWS--VGATYTLNTTWTLRAGLAFDE-QAGKA--TL 344
               S+  +     +  E+   +  WS  VGA+Y LN  W +RAG A+D+   G A  ++
Sbjct: 311 NSGVSAMGQAAGLGRVAEEMNWHDTWSTAVGASYQLNPQWLIRAGYAYDQAPVGNADRSV 370

Query: 345 SIPDSDRFWYSAGLTYTLTPQLTMDAGFALVQSRKGSFTEKNQIG 389
            +P  +R   + G  Y+    LT+D  +  +   K S    N  G
Sbjct: 371 RVPVGNRQAVTLGGAYSPNADLTLDFAYGYLWDSKASVQHSNDSG 415