Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., membrane protein involved in aromatic hydrocarbon degradation (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 84.7 bits (208), Expect = 5e-21
 Identities = 95/415 (22%), Positives = 174/415 (41%), Gaps = 24/415 (5%)

Query: 9   VAISALIAGQVSAAGFQVAEHSASGLGRAFSGEAAVADNASVLARNPAAMMLFETAQFSG 68
           V ++ L+     A+G+ V E SA G     +  A  AD +SV A NPA +     AQ   
Sbjct: 11  VLVALLLPLHAHASGYAVYEWSARGTALGGAMVARDADPSSV-AYNPANITDLPGAQVQV 69

Query: 69  ALSIVDPEVNVDDLSNNQSMKDVAP-LQIVPAAYYIRPINDQWAWGLAMFTTYGVATDYP 127
             + + P   +D  S +Q+ +D +  +  +P AYY + +ND + +G  +F+  G+ T+Y 
Sbjct: 70  GATAIKPAATMDFKSASQTDRDFSDAIWGLPTAYYTQQLNDHYWFGFGVFSRVGLGTEYA 129

Query: 128 -NEIYAGDL-AGDTSLISVNLNPNIAYRVNPELSLGFGLDLVAAKAKLTRHKGGLAPFMG 185
             + +AG        + S+  NPN+A + + + S+  G++    +           P   
Sbjct: 130 GGDNWAGRYNCSYAGIQSLTFNPNLAMKFSDQFSMAVGVEATYLRFMY----DSTVPL-- 183

Query: 186 GGNPSDNLIGMTGETLALGWNIGALYELDEQNRIGFGYRSRVKLNFDDGEFSSYDSGIAT 245
               +D    +  +  A G N GA Y+  +    G  +RS++ L        +     + 
Sbjct: 184 ----ADVKQEIDADGWAYGLNAGARYKPYDWLAFGLAWRSQIDLKVTGDVDFTRKKVTSP 239

Query: 246 SAVVPGQLK--IELPAIWELSGFHQLNEQWAVHYSYQQTDWSSFEELTATSSQCKNG--T 301
             +  G +     LP         +  ++ ++      T WS++E LT   +    G   
Sbjct: 240 PTISQGGISGTEPLPESVTFGVMVKPIDRLSLEADVVWTRWSAYEALTMDYNPSLLGMYP 299

Query: 302 CFQKIEQYQDNGRWSVGATYTLNTTWTLRAGLAFDEQA---GKATLSIPDSDRFWYSAGL 358
              K + +++  R+  GA Y L  +  LRAG  +D+          ++P SDR   S G 
Sbjct: 300 TVSKEKDWKNTWRFQFGAEYALTDSVDLRAGYVYDQSPINDKYEDFAVPCSDRQIVSVGA 359

Query: 359 TYTLTPQLTMDA--GFALVQSRKGSFTEKNQIGQNLQFESEAVAYISALQFNYRF 411
            + +     +D   G+  +  R       N I   ++ E +A A+++ L   Y+F
Sbjct: 360 GWKVDQNWVVDVFYGYLWMVDRHYDARPVNYINYEVERE-DAHAHMAGLSVTYKF 413