Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., membrane protein involved in aromatic hydrocarbon degradation (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 95.5 bits (236), Expect = 3e-24
 Identities = 94/355 (26%), Positives = 155/355 (43%), Gaps = 38/355 (10%)

Query: 21  AAGFQVAEHSASGLGRAFSGEAAVADNASVLARNPAAMMLFETAQFSGALSIVDPEVNVD 80
           AAGF + E SA G     +  A  AD +S+ A NPA +   E  Q    +++V P+V  D
Sbjct: 21  AAGFAMYEFSARGNALGGAMTARRADPSSI-AFNPALVTQLEGTQTLAGVTVVAPQVTAD 79

Query: 81  DLSNNQSMKDVAPLQIVPAAYYIRPINDQWAWGLAMFTTYGVATDYPNEIYAGDLAGDTS 140
              N  S    + +  +P AY    IND    G+  F+ +G+ T+YP+       AG T 
Sbjct: 80  --VNGSSTDTESNMWTIPHAYATTQINDNLFLGVGTFSRFGLGTEYPS-----GWAGRTE 132

Query: 141 LISVNL-----NPNIAYRVNPELSLGFGLDLVAAKAKLTRHKGGLAPFMGGGNPSDNLIG 195
           L SVN+     NP +  R + + + GFG++ +  +      K  + P  G    +D    
Sbjct: 133 LQSVNIQSMSVNPVLGVR-HGDFAFGFGVEAMWFEYD---QKKAITPMPG----ADIDGR 184

Query: 196 MTGETLALGWNIGALYELDEQNRIGFGYRSRVKLNFDDGEFSSYDSGIATSAVVPGQL-- 253
           + G+    G N GA ++  +   +G  +R+ +K   +    +++D      AV+PG    
Sbjct: 185 VKGDATGFGLNGGAWWKATDSVALGASFRTPIKQKLEGR--ATFDK---NGAVLPGMFND 239

Query: 254 -----KIELPAIWELSGFHQLNEQWAVHYSYQQTDWSSFEELTATSSQ--CKNGTCFQKI 306
                 + LP    +    + + +W+V     +T WSS++EL            T   K 
Sbjct: 240 TDAEGSVTLPGEVRVGVAWEPDNRWSVAVDVTRTFWSSYDELRIGYGHPLASGVTESLKT 299

Query: 307 EQYQDNGRWSVGATYTLNTTWTLRAGLAFD---EQAGKATLSIPDSDRFWYSAGL 358
            +++D  R  +G  Y L     LRAG  +D     +      +P +DR  YS G+
Sbjct: 300 TEWRDVWRLGLGVEYRLTDMVDLRAGYVYDCEPVNSDHLDFLVPANDRQLYSVGV 354