Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., membrane protein involved in aromatic hydrocarbon degradation from Marinobacter adhaerens HP15

 Score =  106 bits (265), Expect = 1e-27
 Identities = 89/355 (25%), Positives = 153/355 (43%), Gaps = 31/355 (8%)

Query: 34  LGRAFSGEAAVADNASVLARNPAAMMLFETAQFSGALSIVDPEVNVDDLS-----NNQSM 88
           +G A +G AA  +NA+ +  NPA M        S   +++D +    + S     NN S+
Sbjct: 1   MGTANAGAAANPENATTVLFNPAGMSQLSGTNISFGAAVLDIDAEAKESSIRTSRNNPSV 60

Query: 89  K--------DVAPLQIVPAAYYIRPINDQWAWGLAMFTTYGVATDYPNEIYAGDLAGDTS 140
                    D+A   ++P  Y    IN+    G  +   YG+A DY N+      A  T 
Sbjct: 61  PVTPASSGGDIADPAVLPNFYLSHEINESIDVGFGIHAPYGLAADYDNDFAGRFFADKTE 120

Query: 141 LISVNLNPNIAYRVNPELSLGFGLDLVAAKAKLTRHKGGLAPFMGGGNP-SDNLIGMTGE 199
           L ++   P+++      LS+G GL+++ A+ +L+R++   A          +      G+
Sbjct: 121 LTAIAFTPSVSLNNGQGLSMGVGLNVLYAEGRLSRYQDISAQVGTAALALEEPYADAEGD 180

Query: 200 TLALGWNIGALYELDEQNRIGFGYRSRVKLNFD-DGEFS-----SYDSGIATSAVVPGQL 253
            + + + +G LYEL    +IG   ++  +L  + D E S     S   G   SA    ++
Sbjct: 181 DVGMTFRVGFLYELTSATQIGLTLQTGTELELEGDLEISGITNPSNPMGPTLSASESIKV 240

Query: 254 KIELPAIWELSGFHQLNEQWAVHYSYQQTDWSSFEELTATSSQC--------KNGTCFQK 305
            + +P    L   H L +   +        WS FEEL   S++         + G     
Sbjct: 241 PLAIPESATLGLRHSLTDNVTLLAGATYARWSRFEELDIVSTEAGGAISGAPQEGAVISH 300

Query: 306 I-EQYQDNGRWSVGATYTLNTTWTLRAGLAFDEQAGK--ATLSIPDSDRFWYSAG 357
           + EQ++++ + + GA +  +  W  +AG A+DE       T  IP SDR W + G
Sbjct: 301 VTEQWENSWQINAGAIWQASPEWAFKAGYAWDESPVNQYVTARIPSSDRHWLTLG 355