Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., outer membrane protein, OMPP1/FadL/TodX family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  109 bits (272), Expect = 2e-28
 Identities = 96/386 (24%), Positives = 163/386 (42%), Gaps = 21/386 (5%)

Query: 2   LYKSSLAVAISALIAGQVSAAGFQVAEHSASGLGRAFSGEAAVADNASVLARNPAAMMLF 61
           +Y+  +AVA+ A+ A    AAGF + E  A G     +  A  A + S +A NPA +   
Sbjct: 1   MYRFIIAVALCAVWAASAHAAGFAMHEFGARGNALGGAMVARPATDPSSIAFNPALVTHL 60

Query: 62  ETAQFSGALSIVDPEVNVDDLSNNQSMKDVAPLQIVPAAYYIRPINDQWAWGLAMFTTYG 121
           +T Q    +++V PEV +D  +  +S    A +  +P AY   P+ D   +G+  F  +G
Sbjct: 61  DTPQVLAGVTMVQPEVTID--TPGESTTTEANVWAIPHAYATTPLTDTMYFGVGAFPRFG 118

Query: 122 VATDYPNEIYAGDLAGDTSLISVNLNPNIAYRVNPELSLGFGLDLVAAKAKLTRHKGGLA 181
           +  +Y              + SV++NP + +R   + + GFG++ +              
Sbjct: 119 LGNEYSKTWPMASELTYVGIQSVSVNPVLGFRPTKDFAFGFGVEAM------------YF 166

Query: 182 PFMGGGNPSDNLIGMTGETLALGWNIGALYELDEQNRIGFGYRSRVKLNFDD-GEFSSYD 240
            F     P      + G++   G N G  ++  E   +G  +R+ VK +      F +  
Sbjct: 167 DFEEKMRPLGMDARIKGDSTGFGLNGGMWWQAFEDIALGASFRTPVKQHVKGRATFDNVP 226

Query: 241 SGIA-TSAVVPGQLKIELPAIWELSGFHQLNEQWAVHYSYQQTDWSSFEELTATSSQCKN 299
           +G          +  I LP       + Q  E+  V     +T WSS++EL         
Sbjct: 227 AGYGPLFRDTDAEGDITLPGEVRFGVYWQATERLGVEVGAMRTFWSSYDELRIDYGSPVG 286

Query: 300 G-TCFQKIEQYQDNGRWSVGATYTLNTTWTLRAGLAFDEQ---AGKATLSIPDSDRFWYS 355
           G     K  +++D  R S GA Y L     LRAG  +DE+   +      +P +DR   S
Sbjct: 287 GKPASIKQTEWEDVWRLSAGAEYRLTDNVDLRAGYVYDEEPVNSAHLDFMVPANDRHLMS 346

Query: 356 AGLTYTLTP-QLTMDAGFALVQSRKG 380
            G+ Y   P ++ +   + L+  R+G
Sbjct: 347 LGVGYHEGPWRVDLSYTYLLITDREG 372