Pairwise Alignments

Query, 412 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., outer membrane transport protein, OmpP1/FadL/TodX family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 103/416 (24%), Positives = 175/416 (42%), Gaps = 27/416 (6%)

Query: 7   LAVAISALIAGQVSAAGFQVAEHSASGLGRAFSGEAAVADNASVLARNPAAMMLFETAQF 66
           L V   AL   Q  AAG+ V E SA G     +  A  AD +SV A NPAA+   E AQ 
Sbjct: 5   LLVLCLALCPLQAWAAGYGVYEWSARGNALGGAMVARDADPSSV-AYNPAAITDLEGAQI 63

Query: 67  SGALSIVDPEVNVDDLSNNQSMKDVA---PLQIVPAAYYIRPINDQWAWGLAMFTTYGVA 123
               + + P   +   SN    +D      +  +P  YY + ++D + +G  MF+  G+ 
Sbjct: 64  QMGATAIAPTAKMT--SNTPGKRDAEFSDSIWGLPTFYYTQQLSDNYWFGFGMFSRVGLG 121

Query: 124 TDYPN-EIYAGDLAGDTSLI-SVNLNPNIAYRVNPELSLGFGLDLVAAKAKLTRHKGGLA 181
           TDY + + + G      + I SV+LNPN+A ++  ELS+ FGLD    +           
Sbjct: 122 TDYKDTDTWPGRYNCSYAAIHSVSLNPNLAMKLTDELSVAFGLDATYLR----------- 170

Query: 182 PFMGGG--NPSDNLIGMTGETLALGWNIGALYELDEQNRIGFGYRSRVKLNFDDGEFSSY 239
            FM     +P D +  +  +  A G N+GA Y+  +    G  +RS ++L  +     + 
Sbjct: 171 -FMYDTTISPVDVMQQIDADGWAYGLNLGARYKPYDWLAFGVAWRSEMQLTVNGNVDFTQ 229

Query: 240 DSGIATSAVVPGQLKIELPAIWELSGFHQLNEQWAVHYSYQQTDWSSFEELTATSSQCKN 299
              +   A    +    +P         +  ++ ++      T WS++  L         
Sbjct: 230 KGAVPAPAARDVRGTEPIPESITFGVMVKPFDKLSLEVDAVWTRWSAYNTLVINYDPALY 289

Query: 300 GTCFQKIEQ-YQDNGRWSVGATYTLNTTWTLRAGLAFDE---QAGKATLSIPDSDRFWYS 355
           G      E+ +++  R   GA Y L  +  LRAG  +D+          ++P SDR   +
Sbjct: 290 GKSSVSAEKNWKNTWRLQFGAEYALTDSIDLRAGYVYDQTPVDDAHEDYAVPCSDRQIAT 349

Query: 356 AGLTYTLTPQLTMDAGFALVQSRKGSFTEKNQIGQNLQFESEAVAYISALQFNYRF 411
            G+ + +     +DA ++ +      + E    G       +A A+++ L   Y+F
Sbjct: 350 TGIGWKINEAWVLDASYSYLWMTDREY-EARSGGIYDSTREDAHAHMAGLSLTYKF 404