Pairwise Alignments

Query, 690 a.a., alpha-amylase from Vibrio cholerae E7946 ATCC 55056

Subject, 707 a.a., glycogen debranching protein GlgX from Synechocystis sp000284455 PCC 6803

 Score = 51.6 bits (122), Expect = 1e-10
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 10/114 (8%)

Query: 228 GRHKDGQEEIGTFHGGDLKGVIAKLDHIQSLGTDAIWLSPIVE--QVHGFVGGGEKGSFP 285
           G  KD    +   H G   G+++K+ ++Q LG + I L PI E  +        E G F 
Sbjct: 169 GFTKDPSSGVKENHRGTFAGILSKIPYLQELGVNTIELMPIFEFDEFEHSRYHPETGEF- 227

Query: 286 FYAYHGYWTRDFTKIDANFG-------KDEDLQTLVREAHRRGIKILMDAVINH 332
              Y GY T +F    A +        + ++L+ LV+E H+ GI +++D V NH
Sbjct: 228 LVNYWGYSTVNFFAPKAGYAATGKFGMQIDELKNLVKELHKVGISVILDVVFNH 281



 Score = 30.0 bits (66), Expect = 4e-04
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 590 RNAANALLLTPGAIQVYYGDEVAR-EAGPYADDFHQGTRSDMPWEWNAERQALLKHWQTL 648
           RNA   LL++ G   +  GDE+ + + G      H    + + W    + QA  +  +  
Sbjct: 515 RNAIAILLVSQGVPMLLMGDEMGKTQDGNNNTYCHDSPFNWLNWHLLEQNQAWFRFVKHC 574

Query: 649 GQFRQRHPAIGTGEH 663
             FR  HP +   EH
Sbjct: 575 IAFRLAHPVLRNSEH 589



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 425 VTPPQWLLNNPGT-RVVSKPNYTVADYLIEWQSDWVRRFGIDGFRIDTVKHVEGEVW 480
           +TP  +  N  GT   ++  N  V   +++    W   F IDGFR D    +  + W
Sbjct: 305 LTPEGYYFNFSGTGNTLNCNNPIVRGMVLDCLRYWTAEFHIDGFRFDLASILGRDPW 361