Pairwise Alignments

Query, 690 a.a., alpha-amylase from Vibrio cholerae E7946 ATCC 55056

Subject, 683 a.a., alpha amylase, catalytic region (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (261), Expect = 9e-27
 Identities = 128/563 (22%), Positives = 216/563 (38%), Gaps = 113/563 (20%)

Query: 156 ELQDAMTGQVVTIEQGKVRLTPSANSGGLVLLEPKQTAKAEPKQPFTYRNANI-YFVMVD 214
           +L  A TG ++T+   +   T +  +   +  E K  A    K+   Y N ++ Y +  D
Sbjct: 136 DLSTASTG-ILTLVLSRPASTINPATDLTIPYELKARAPGS-KERQGYGNRDVMYLITPD 193

Query: 215 RFYNADPSNDGSYG---------RHKDGQEEIGTFHGGDLKGVIAKLDHIQSLGTDAIWL 265
           RF N D +ND   G           + G       HGGDL G+  +LD++  LG   +WL
Sbjct: 194 RFANGDKANDNLPGFDDKPSNPVYSEPGNSRDNARHGGDLAGIEHRLDYLNDLGVTQLWL 253

Query: 266 SPIVEQVHGFVGGGEKGSFPFYAYHGYWTRDFTKIDANFGKDEDLQTLVREAHRRGIKIL 325
           +P++E              P Y+YHGY   DF +IDA FG +   Q LVR+A  RG+ ++
Sbjct: 254 NPLLENRQ-----------PAYSYHGYAITDFYQIDARFGSNAQYQALVRKAADRGLGVI 302

Query: 326 MDAVINH--AGYATLADLQQDAVQVVNAPMLPERWNDWKPSADENWHSFHQAIDYQSKNW 383
           MD V+NH  +G+  + DL                +NDW      + H+ H+    Q    
Sbjct: 303 MDVVLNHMGSGHPWMQDLP---------------FNDW--VNPRSMHTSHRRTAVQDP-- 343

Query: 384 QQWWGPDWVRAGLPGYPAPGSSDITMN---LAGLPDFRTESPQAVTPPQWLLNNPGTRVV 440
                          Y AP  +    +   +  +PD    +P                  
Sbjct: 344 ---------------YAAPKDAAAFTDGWFVDSMPDLNQRNPH----------------- 371

Query: 441 SKPNYTVADYLIEWQSDWVRRFGIDGFRIDTVKHVEGEVWQRLKQRATESLAAWRKDNNQ 500
                 +A YLI+    W+   G+ G RIDT  + +    +   +  +E++ A     N 
Sbjct: 372 ------LATYLIQNNLWWIEYAGLSGLRIDTWSYSD----KHFLKAFSEAIMAEYPHFNM 421

Query: 501 SGEPFW----MMGEVWGHGAYRSPYFDDGFDALINFDIQ----KRMDNGAACLSQMAMVY 552
            GE  W     +   W         +      L++F +     + ++      + +  +Y
Sbjct: 422 VGEE-WSGNPAVVSYWQRAKQNPDGYQTSLPGLMDFPLYEVLLQAVNEEERWGTGLIRLY 480

Query: 553 RDYAQTLAKYPDFNPVSYMSSHDTELFFGRF-KSLDMQRNAANALLLTPGAIQVYYGDEV 611
              A  +      N V +  +HDT   +    + ++  + A   +LL+    Q++YG E 
Sbjct: 481 EALANDMLYPHAQNLVLFEGNHDTNRLYSLLGRDMNKFKLALAYVLLSNRVPQIFYGTEF 540

Query: 612 AREAGPYADDFHQGTRSDMPWEWNA------------ERQALLKHWQTLGQFRQRHPAIG 659
           A ++ P         R+DMP    A            + +   +  + L  FR+   A+ 
Sbjct: 541 AMQS-PVEGRNDGAVRADMPGFGKAGFSKSDIDAMAGDSKTAFEFIRALLHFRKTSDAVH 599

Query: 660 TGE-HREIAQSNAYVFTRTLGED 681
            G+    + QS  YV  R   +D
Sbjct: 600 RGKLVHFVPQSGLYVQLRQAPDD 622