Pairwise Alignments

Query, 690 a.a., alpha-amylase from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Alpha amylase, catalytic region (NCBI) from Rhodospirillum rubrum S1H

 Score = 60.5 bits (145), Expect = 2e-13
 Identities = 99/419 (23%), Positives = 151/419 (36%), Gaps = 116/419 (27%)

Query: 243 GDLKGVIAKLDHIQSLGTDAIWLSPIVEQVHGFVGGGEKGSFPFYAYHGYWTRDFTKIDA 302
           GDL G+  +LD++  LG DAIW+SP               + P   + GY  +D+  +D 
Sbjct: 29  GDLAGIAQRLDYLSWLGVDAIWISPFY-------------TSPMKDF-GYDIQDYRDVDP 74

Query: 303 NFGKDEDLQTLVREAHRRGIKILMDAVINHAGYATLADLQQDAVQVVNAPMLPER-WNDW 361
            FG   D   L   A   G+K+++D V NH      +D     ++   +P   +R W  W
Sbjct: 75  IFGTLADFDALAARARALGLKLILDFVPNHT-----SDRHPWFLESRQSPASAKRDWYIW 129

Query: 362 K-PSAD----ENWHSFH--QAIDYQSKNWQ-------------QWWGPD----------- 390
           + P+AD     NW +     A +Y   + Q              W  P+           
Sbjct: 130 RDPAADGGPPTNWLAEFGGSAWEYDEASGQYYYHAFLKEQPDLNWRNPEVRAAMYDAMRF 189

Query: 391 WVRAGLPGYPAPGSSDITMNLAGLPDFRTESPQAVTPPQWLLNNPGTRVVSKPNYTVADY 450
           W+  G+ G+      D+  +L     FR   P    PP     N G      P YT    
Sbjct: 190 WLERGVDGFRV----DVMWHLIKDDQFRDNPPNPARPP-----NAGPANALIPLYTADRP 240

Query: 451 LIEWQSDWVR--RFGIDGFRIDTVKHVEGEVWQRLKQRATESLAAWRKDNNQSGE---PF 505
            +    D VR  R  +D +     + + GE+W       T+ L  +   + +       F
Sbjct: 241 EVH---DIVREMRAVVDAY---PERVLIGEIW-----LPTDRLVTYYGHDLRGAHLPFNF 289

Query: 506 WMMGEVWGHGAYRSPYFDDGFDALINFDIQKRMDNGAACLSQMAMVYRDYAQTLAKYPDF 565
            ++G  W  G  +           I  D +K +  G                    +P++
Sbjct: 290 QLIGAAWDAGVIKE----------IVGDYEKALPRGG-------------------WPNW 320

Query: 566 NPVSYMSSHDTELFFGRFKSLDMQRNAANALLL---TPGAIQVYYGDEVAREAGPYADD 621
                M +HD     GR  S    R A  A+LL     G   +YYGDE+A    P   D
Sbjct: 321 ----VMGNHDK----GRIASRLGPRQARLAMLLLLTLRGTPTLYYGDEIAMRDVPIPPD 371