Pairwise Alignments

Query, 690 a.a., alpha-amylase from Vibrio cholerae E7946 ATCC 55056

Subject, 1100 a.a., Alpha amylase, catalytic region (NCBI) from Rhodospirillum rubrum S1H

 Score = 58.5 bits (140), Expect = 2e-12
 Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 40/134 (29%)

Query: 203 YRNANIYFVMVDRFYNADPSNDGSYGRHKDGQEEIGTFHGGDLKGVIAKLDHIQSLGTDA 262
           Y++A +Y + V  F+  D + DG                 GD KG+  KLD++  LG  A
Sbjct: 7   YKDAIVYQLHVKAFF--DSNGDGF----------------GDFKGLTEKLDYLSDLGVTA 48

Query: 263 IWLSPIVEQVHGFVGGGEKGSFPFYAY----HGYWTRDFTKIDANFGKDEDLQTLVREAH 318
           +W+                   PFY       GY   D+  I   +G   D +  VREAH
Sbjct: 49  VWI------------------LPFYPSPLRDDGYDIADYKAIHRAYGTMGDFRRFVREAH 90

Query: 319 RRGIKILMDAVINH 332
            RG+K++ + VINH
Sbjct: 91  ERGLKVITELVINH 104



 Score = 29.3 bits (64), Expect = 0.001
 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 36/112 (32%)

Query: 594 NALLLT-PGAIQVYYGDEVAREAGPYADDFHQGTRSDMPWE------------------- 633
           N+LL++ PG   +YYGDE+      +  D   G R+ M W                    
Sbjct: 361 NSLLMSMPGTPIIYYGDEIGMGDNIFLGD-RDGVRTPMQWSPDRNGGFSRADPASLYLPT 419

Query: 634 ----------WNAERQ-----ALLKHWQTLGQFRQRHPAIGTGEHREIAQSN 670
                      N E Q     +LL   + L   R+RHP+ G G  R +   N
Sbjct: 420 IMDAVYGFFAVNVEAQSRSPSSLLNWMRRLIAVRKRHPSFGRGTLRFLYPGN 471