Pairwise Alignments

Query, 690 a.a., alpha-amylase from Vibrio cholerae E7946 ATCC 55056

Subject, 686 a.a., alpha amylase, catalytic region (RefSeq) from Shewanella sp. ANA-3

 Score =  105 bits (262), Expect = 7e-27
 Identities = 119/510 (23%), Positives = 202/510 (39%), Gaps = 96/510 (18%)

Query: 208 IYFVMVDRFYNADPSNDGSYG--RHKDGQEEIGTFHGGDLKGVIAKLDHIQSLGTDAIWL 265
           IY +  DRF N +PSND       H       G  HGGD++G+   LD++  LG   +W+
Sbjct: 162 IYLITPDRFANGNPSNDNQSDMLEHAAPDNSDGR-HGGDIEGIRQHLDYLAKLGVTQLWI 220

Query: 266 SPIVEQVHGFVGGGEKGSFPFYAYHGYWTRDFTKIDANFGKDEDLQTLVREAHRRGIKIL 325
           +P++E                Y+YHGY   +  ++D  FG ++D Q LV EA + G+ ++
Sbjct: 221 NPLLENNQAQ-----------YSYHGYAMTNLYRVDPRFGSNQDYQRLVTEAKQHGLGVI 269

Query: 326 MDAVINHAG--YATLADLQQDAVQVVNAPMLPERWNDWKPSADENWHSFHQAIDYQSKNW 383
            D V+NH G  +  L DL       +N P  P                   A D Q+   
Sbjct: 270 KDVVLNHIGSNHWWLKDLPSS--DWLNVPQQP------------------NATDTQTA-- 307

Query: 384 QQWWGPDWVRAGLPGYPAPGSSDITMNLAGLPDFR---TESPQAVTPPQ------WLLNN 434
                           PA  S+ ++    G    R    + P A    +      W +++
Sbjct: 308 ----------------PAASSTSLSSTNLGFTSHRRTTVQDPYADMQDKRDFVDGWFVDS 351

Query: 435 PGTRVVSKPNYTVADYLIEWQSDWVRRFGIDGFRIDTVKHVEGEVWQRLKQRATESLAAW 494
                +++ N  +A YLI+    WV   G+ G R DT  + +    +    + T++L A 
Sbjct: 352 MPD--LNQRNPKLATYLIQNSIWWVEYAGLSGIREDTYSYAD----KAFLTQWTKALMAE 405

Query: 495 RKDNNQSGEPFWMMGEV----WGHGAYRSPYFDDGFDALINFDIQKR----MDNGAACLS 546
               N  GE  W    +    W  G   +  +     +L++F + ++    ++      +
Sbjct: 406 YPHFNIVGEE-WTANPITVSYWQKGKINADGYSSDLPSLMDFPLYEKLLESLNEPEGWDT 464

Query: 547 QMAMVYRDYAQTLAKYPDFNPVSYMSSHDTELFFGRFK-SLDMQRNAANALLLTPGAIQV 605
               +Y   A  +        V +  +HDT   +   K +L + + A   +L      Q+
Sbjct: 465 GFIKLYEMLANDVVYATPSQLVLFEGNHDTNRIYSLLKENLPLYQMALTYVLTAKRIPQL 524

Query: 606 YYGDEVAREAGPYADDFHQG-TRSDMPWEW-------------NAERQALLKHWQTLGQF 651
           +YG EV   +    +  H G  RSD P  +             NA++Q  L   +TL  +
Sbjct: 525 FYGTEVLMTSP--TEGRHDGVVRSDFPGGFANNKVNGFSGKGLNAKQQQALAFVRTLLNY 582

Query: 652 RQRHPAIGTGEHRE-IAQSNAYVFTRTLGE 680
           R+   A+ TG+    + Q+  YV  R + +
Sbjct: 583 RKHSTALQTGDLLHFVPQNGIYVQFRCVAK 612