Pairwise Alignments

Query, 227 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Pseudomonas stutzeri RCH2

 Score =  171 bits (432), Expect = 1e-47
 Identities = 98/221 (44%), Positives = 134/221 (60%), Gaps = 3/221 (1%)

Query: 1   MLHFQSIEKQYSLGVQ-SVPALRGVSGVVQQGEMLALCGPSGSGKSTLLNILGLLDPNYQ 59
           +L    + K +++G       L G+   + +GE+ AL GPSGSGKSTLLN++GLLD    
Sbjct: 13  VLRLDQVRKAFNVGTPLETEVLHGIDLSLYRGELAALIGPSGSGKSTLLNLIGLLDAPSS 72

Query: 60  GEVALEGRVY-PRKGKSAALLRRTQFGFVFQKFNLVSVMTALENVAYPLML-NGFSRRDQ 117
           GE+ L G+       ++   LR    GFVFQ  +L+S  + LENV  PLM+ +G      
Sbjct: 73  GELYLLGQATRDSDDETRTHLRNQAIGFVFQFHHLISAFSVLENVLMPLMIRHGKPSPAD 132

Query: 118 HKLAHDMLTKVGLEAVMQQRPDHLSGGQQQRVAIARALVHNPKLVVADEPTASLDSQTAN 177
            +LA  +L +VGL A   ++P  +SGGQQQRVAIARALV  P L++ADEPT +LD++TA 
Sbjct: 133 IELARGLLDEVGLGAFADKKPTQISGGQQQRVAIARALVTRPPLLLADEPTGNLDTRTAQ 192

Query: 178 LVISLMKSLGHELGTTFVVATHDGRMAAQCDRTLNLVDGQI 218
            V  L   +  + G   +V THD R+AA C RT+ LVDG I
Sbjct: 193 SVFELFHRINAQFGCAVLVVTHDPRLAADCARTIQLVDGHI 233