Pairwise Alignments

Query, 227 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., putative macrolide efflux ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  161 bits (407), Expect = 1e-44
 Identities = 93/219 (42%), Positives = 135/219 (61%), Gaps = 3/219 (1%)

Query: 1   MLHFQSIEKQYSLGVQSVPALRGVSGVVQQGEMLALCGPSGSGKSTLLNILGLLDPNYQG 60
           M+  Q++ K + +G   V ALRGV   ++Q E +A+ GPSGSGKSTL+NI+G LD    G
Sbjct: 1   MISLQALTKSFRMGDAEVQALRGVDIHIRQNEFVAIMGPSGSGKSTLMNIIGCLDRPTSG 60

Query: 61  EVALEGRVYPRKGKSA-ALLRRTQFGFVFQKFNLVSVMTALENVAYPLMLNGFSRRDQHK 119
              L G         A + +R  + GFVFQ F+L+  ++AL+NV  PL  +   R D+  
Sbjct: 61  NYLLNGSAVGGLSDDALSAVRNREIGFVFQSFHLLPRLSALDNVLLPLRFSETPRGDRQH 120

Query: 120 LAHDMLTKVGLEAVMQQRPDHLSGGQQQRVAIARALVHNPKLVVADEPTASLDSQTANLV 179
            A ++L +VGL   +  RP+ LSGGQ+QRVAIARALV+ P L++ADEPT +LDS+T+  +
Sbjct: 121 -AIELLERVGLGQRLDHRPNQLSGGQRQRVAIARALVNRPTLLLADEPTGALDSKTSVEI 179

Query: 180 ISLMKSLGHELGTTFVVATHDGRMAAQCDRTLNLVDGQI 218
           ++L   L H  G T V+ TH+  +A    R + + DG +
Sbjct: 180 MALFDEL-HLSGQTIVLVTHEEEVAECAGRIIRMRDGVV 217