Pairwise Alignments

Query, 227 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  164 bits (416), Expect = 1e-45
 Identities = 86/202 (42%), Positives = 130/202 (64%), Gaps = 1/202 (0%)

Query: 18  VPALRGVSGVVQQGEMLALCGPSGSGKSTLLNILGLLDPNYQGEVALEGRVYPRKGKSAA 77
           V A++ +   + QGE +A+ GPSGSGK+TLLN++G +D    G V ++G       + A 
Sbjct: 20  VAAVKSLDLTIAQGEFVAIMGPSGSGKTTLLNMIGGIDSPSSGAVFIDGEDITHLSEQAL 79

Query: 78  L-LRRTQFGFVFQKFNLVSVMTALENVAYPLMLNGFSRRDQHKLAHDMLTKVGLEAVMQQ 136
           +  RR   GF+FQ ++L+ V+TALENV + + L G S  +    A  +L +VGL A   +
Sbjct: 80  IAFRRDHVGFIFQDYSLLPVLTALENVEFVMQLQGHSEAECRDRAMALLAQVGLAAQQDK 139

Query: 137 RPDHLSGGQQQRVAIARALVHNPKLVVADEPTASLDSQTANLVISLMKSLGHELGTTFVV 196
            P  LSGGQQQRVA+ARAL   P+ V+ADEPTA+LD+++   ++ +M+SL  + GTTF+ 
Sbjct: 140 IPAKLSGGQQQRVAVARALAPRPRFVMADEPTANLDAKSTAELLDIMQSLNEQEGTTFIF 199

Query: 197 ATHDGRMAAQCDRTLNLVDGQI 218
           +THD R+ A+  R +   DG++
Sbjct: 200 STHDPRVIARAKRVIVFEDGRL 221