Pairwise Alignments

Query, 227 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  160 bits (404), Expect = 3e-44
 Identities = 91/202 (45%), Positives = 125/202 (61%), Gaps = 7/202 (3%)

Query: 21  LRGVSGVVQQGEMLALCGPSGSGKSTLLNILGLLDPNYQGEVALEGRVY---PRKGKSAA 77
           L G++  V+ GE +A+ GPSGSGKSTLL +L  LD   +GE+ L+G        +GK+A 
Sbjct: 26  LNGINLDVKSGESVAILGPSGSGKSTLLGLLAALDSPTKGEIVLDGVTLNGLDEEGKAA- 84

Query: 78  LLRRTQFGFVFQKFNLVSVMTALENVAYPLMLNGFSRRDQHKLAHDMLTKVGLEAVMQQR 137
            LR+ +  F+FQ F LV  + ALENV  P  L+G S   Q   A  ML +VGL   +   
Sbjct: 85  -LRKQKVSFIFQSFMLVDTLNALENVMLPAELSGISNAKQK--AQQMLERVGLSHRLNHF 141

Query: 138 PDHLSGGQQQRVAIARALVHNPKLVVADEPTASLDSQTANLVISLMKSLGHELGTTFVVA 197
           P+ LSGG+QQRVAIARA +  PK++ ADEPT +LD   ++ V  ++  L  E  TT V+ 
Sbjct: 142 PNQLSGGEQQRVAIARAFICEPKVLFADEPTGNLDGANSDRVADMLFELNRESDTTLVLV 201

Query: 198 THDGRMAAQCDRTLNLVDGQIS 219
           THD ++A +C R LN+  GQ+S
Sbjct: 202 THDLQLANRCQRRLNMQAGQLS 223