Pairwise Alignments

Query, 227 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., lipoprotein releasing system, ATP-binding protein (RefSeq) from Shewanella loihica PV-4

 Score =  177 bits (449), Expect = 2e-49
 Identities = 93/220 (42%), Positives = 141/220 (64%), Gaps = 1/220 (0%)

Query: 1   MLHFQSIEKQYSLGVQSVPALRGVSGVVQQGEMLALCGPSGSGKSTLLNILGLLDPNYQG 60
           +L   ++ K+Y  G      L GV+  + +GE +A+ G SGSGKSTLL+I+G LD    G
Sbjct: 9   LLQVSNVSKRYHEGSIDTQVLSGVNLSIAKGEQVAIIGSSGSGKSTLLHIMGTLDKPSSG 68

Query: 61  EVALEGR-VYPRKGKSAALLRRTQFGFVFQKFNLVSVMTALENVAYPLMLNGFSRRDQHK 119
           +V  +G  +Y       A +R  + GF++Q  +L+   TALENVA P ++    R++  +
Sbjct: 69  QVMFDGEDLYQLSPSRQAAIRNQELGFIYQFHHLLPEFTALENVAMPGLIQKRPRQEVEQ 128

Query: 120 LAHDMLTKVGLEAVMQQRPDHLSGGQQQRVAIARALVHNPKLVVADEPTASLDSQTANLV 179
            A ++L++VGL   +   P  +SGG++QR AIARAL++ PKLV+ADEPT +LD+ + + V
Sbjct: 129 EAKELLSRVGLGHRLHHTPAEMSGGERQRTAIARALINRPKLVLADEPTGNLDAASGDSV 188

Query: 180 ISLMKSLGHELGTTFVVATHDGRMAAQCDRTLNLVDGQIS 219
             L++ LG +LGT FVV THD ++AA+ DR L + DGQ+S
Sbjct: 189 YELIRELGSQLGTAFVVVTHDPKLAARMDRQLKMQDGQLS 228