Pairwise Alignments

Query, 227 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  166 bits (420), Expect = 4e-46
 Identities = 91/219 (41%), Positives = 133/219 (60%), Gaps = 2/219 (0%)

Query: 1   MLHFQSIEKQYSLGVQSVPALRGVSGVVQQGEMLALCGPSGSGKSTLLNILGLLDPNYQG 60
           ML  ++I K +   +    ALR  +  V++GE +A+ GPSGSGK+T LNI GLL+    G
Sbjct: 1   MLTMKNINKVFKTDLVETHALRDFNLEVKEGEFVAVTGPSGSGKTTFLNIAGLLEGFTNG 60

Query: 61  EVALEG-RVYPRKGKSAALLRRTQFGFVFQKFNLVSVMTALENVAYPLMLNGFSRRDQHK 119
           E  L+   +       AA +R  + GF+FQ FNL+  +   ENV  PL   GF+ +++ +
Sbjct: 61  EYHLDDVNISNLSDNKAAAIRNEKIGFIFQGFNLIPDLNLAENVEVPLRYRGFNAKERQR 120

Query: 120 LAHDMLTKVGLEAVMQQRPDHLSGGQQQRVAIARALVHNPKLVVADEPTASLDSQTANLV 179
                L +VGL A M+  P  LSGGQQQRVAIARAL   P+ ++ADEPT +LDS  A  V
Sbjct: 121 RVKAALEQVGLGARMKHLPSQLSGGQQQRVAIARALAGEPRFLLADEPTGNLDSLMARQV 180

Query: 180 ISLMKSLGHELGTTFVVATHDGRMAAQCDRTLNLVDGQI 218
           + L++ + ++ GTT ++ THD  +A +  R + +VDGQ+
Sbjct: 181 MELLEEI-NKAGTTIIMVTHDPELARRAQRNIQIVDGQV 218