Pairwise Alignments

Query, 227 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., lipoprotein releasing system ATP-binding protein LolD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  169 bits (428), Expect = 4e-47
 Identities = 96/221 (43%), Positives = 134/221 (60%), Gaps = 1/221 (0%)

Query: 1   MLHFQSIEKQYSLGVQSVPALRGVSGVVQQGEMLALCGPSGSGKSTLLNILGLLDPNYQG 60
           +L  Q++ K Y  G  +   L  V   V +GE LA+ G SGSGKSTLL+I+G LD    G
Sbjct: 5   LLQVQAVSKSYHDGDVTTQVLSDVDLQVFKGEQLAIVGTSGSGKSTLLHIMGTLDKPSSG 64

Query: 61  EVALEGR-VYPRKGKSAALLRRTQFGFVFQKFNLVSVMTALENVAYPLMLNGFSRRDQHK 119
           +V L G  +Y       A +R    GF++Q  +L+   TALENVA P  + G  R     
Sbjct: 65  KVLLAGEDLYQVSSARQAQIRNQDLGFIYQFHHLLPEFTALENVAMPAFIQGRDRTLAQA 124

Query: 120 LAHDMLTKVGLEAVMQQRPDHLSGGQQQRVAIARALVHNPKLVVADEPTASLDSQTANLV 179
            A  +L +VGL   M   P  LSGG++QRVAIARAL++ PKLV+ADEPT +LD+++   V
Sbjct: 125 DAKVLLERVGLGHRMSHIPAELSGGERQRVAIARALINKPKLVLADEPTGNLDAKSGEAV 184

Query: 180 ISLMKSLGHELGTTFVVATHDGRMAAQCDRTLNLVDGQISL 220
             L++ L ++LGT FVV THD ++AA+ DR L + +G + +
Sbjct: 185 YELIRELANQLGTAFVVVTHDPKLAARMDRQLTMKNGYLQV 225