Pairwise Alignments

Query, 227 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., lipoprotein releasing system, ATP-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score =  168 bits (426), Expect = 8e-47
 Identities = 96/223 (43%), Positives = 134/223 (60%), Gaps = 1/223 (0%)

Query: 1   MLHFQSIEKQYSLGVQSVPALRGVSGVVQQGEMLALCGPSGSGKSTLLNILGLLDPNYQG 60
           +L  Q++ K Y  G  +   L  V   V +GE LA+ G SGSGKSTLL+I+G LD    G
Sbjct: 27  LLQVQAVSKSYHDGDVTTQVLSEVDLQVFKGEQLAIVGTSGSGKSTLLHIMGTLDKPSAG 86

Query: 61  EVALEGR-VYPRKGKSAALLRRTQFGFVFQKFNLVSVMTALENVAYPLMLNGFSRRDQHK 119
           +V L G  +Y       A +R    GF++Q  +L+   +ALENVA P  + G  R     
Sbjct: 87  KVLLAGEDLYQVSSARQAQIRNQDLGFIYQFHHLLPEFSALENVAMPAFIQGRDRAQAQA 146

Query: 120 LAHDMLTKVGLEAVMQQRPDHLSGGQQQRVAIARALVHNPKLVVADEPTASLDSQTANLV 179
            A  +L +VGL   M   P  LSGG++QRVAIARAL++ PKLV+ADEPT +LD+++   V
Sbjct: 147 DAKVLLERVGLGHRMSHIPAELSGGERQRVAIARALINKPKLVLADEPTGNLDAKSGEAV 206

Query: 180 ISLMKSLGHELGTTFVVATHDGRMAAQCDRTLNLVDGQISLEA 222
             L++ L ++LGT FVV THD ++AA+ DR L + +G +   A
Sbjct: 207 YELIRELANQLGTAFVVVTHDPKLAARMDRQLTMKNGYLQAVA 249