Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., Lipoprotein releasing system transmembrane protein LolC from Pseudomonas fluorescens FW300-N2E2

 Score = 61.2 bits (147), Expect = 5e-14
 Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 30/269 (11%)

Query: 95  NPAIRGIQPRIELTGLVSNGQKSTIFVGLGVDDKEFDMKGPFLDLRAGQTLQDPKSPRFD 154
           NP +  + P  ++ GL++N  K +  +  G+ D   + +   +D      +Q  K     
Sbjct: 47  NPQVLAVAPFTQMQGLLTNDGKVSKVLLNGI-DPGLERQVSIID----NFMQQGKLDDLA 101

Query: 155 PTQPQVMLGVDLARNLSVGVGDWVTLLA---TTADGAL--NALDFQVRGLYSTGVPELDK 209
           P    +++G   A  L V +GD +T +A   T   G +      F V G++  G  ELD 
Sbjct: 102 PGSFGIVIGDKAAAKLGVAIGDKLTFVAPEVTVTPGGMFPRMKRFTVVGIFHVGAGELDG 161

Query: 210 RQLYLHLASAQELLNSSKVSTLSVYLFNTENTQTLQTWVEN--QLNQLSLSQELQVTPWQ 267
              YL + + Q+L          ++ +  +  Q L+   ++  Q  +++ +   Q+   +
Sbjct: 162 ---YLGVTNLQDLAR--------LHRWKPDQVQGLRLKFDDLFQAPRVAWTIAQQLGEDR 210

Query: 268 QLAFFYTRVK-DLYDRL---FGVMGTVMAMVVFVALFN---TLTMSVSERTREIGTLSAL 320
             A  +TR   +LY  +     ++G ++ ++V VA FN   TL M V+++  +I  L  L
Sbjct: 211 YYARDWTRTHGNLYQAIRMEKAMIGLLLLLIVAVAAFNIISTLVMVVNDKKGDIAILRTL 270

Query: 321 GAYPSDILAGFVREATLLALCGSLLGTLL 349
           GA P  I+  F+ + T++ + G+ +G L+
Sbjct: 271 GATPGQIMRIFMVQGTVIGVIGTFVGALV 299