Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., Pyoverdine efflux carrier and ATP binding protein from Pseudomonas fluorescens FW300-N2E2

 Score = 52.4 bits (124), Expect = 4e-11
 Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 9/178 (5%)

Query: 192 LDFQVRGLY-----STGVPELDKRQLYLHLASAQELLNSSKVSTLSVYLFNTENTQTLQT 246
           + FQV G+      S+G  + D R    + A++  L  S     + +   +    +  + 
Sbjct: 437 MPFQVVGVLAEKGASSGDSDADDRVAVPYSAASVRLFGSRHPEYVVIAAKDAGKVKEAEQ 496

Query: 247 WVENQLNQL-SLSQELQVTPWQQLAFFYTRVKDLYDRLFGVMGTVMAMVVFVALFNTLTM 305
            V   L +L    ++ ++T    +     R +     + G +  +  +V  + + N + M
Sbjct: 497 AVSRTLLRLHDGKKDFELTNNAAMIQAEARTQGTLSLMLGAIAAISLLVGGIGVMNIMLM 556

Query: 306 SVSERTREIGTLSALGAYPSDILAGFVREATLLALCGSLLG---TLLTGITIVAVRVA 360
           +V ERTREIG   A GA   DIL  F+ EA +L++ G L G    LL G  ++  ++A
Sbjct: 557 TVRERTREIGIRMATGARQRDILRQFLTEAVMLSVVGGLAGIGLALLVGGALLLGKIA 614



 Score = 28.9 bits (63), Expect = 5e-04
 Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 8/107 (7%)

Query: 72  QEEETPLANGLEGSDHIRQVLLANPAIRGI--QPRIELTGLVSNGQKSTIFVGLGVDDKE 129
           Q++   +A  L    HI   +LA+     +  Q  IE+  L+         V L   D+E
Sbjct: 151 QQQRVSIARALMNGGHI---ILADEPTGALDSQSGIEVMALLDELASQGHVVILITHDRE 207

Query: 130 FDMKGP-FLDLRAGQTLQD--PKSPRFDPTQPQVMLGVDLARNLSVG 173
              +    +++R G  + D  P SP      P+ +  VDL + LS G
Sbjct: 208 VAARAKRIIEIRDGLIISDNAPSSPHEVHANPKALQAVDLRQRLSAG 254