Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., lipoprotein releasing system, transmembrane protein, LolC/E family from Pseudomonas stutzeri RCH2

 Score = 52.4 bits (124), Expect = 3e-11
 Identities = 80/328 (24%), Positives = 140/328 (42%), Gaps = 43/328 (13%)

Query: 92  LLANPAIRGIQPRIELTGLVS-NGQKSTIFVGLGVDDKEFDMKGPFLDLRAGQTLQDPKS 150
           L A+  I G+ P  +L G++S  G    I +  G+D +         +   G +L   K 
Sbjct: 85  LSAHSQIVGMAPVTQLEGMLSFKGSMQPIQIS-GIDPQAEAQVSILGERLVGGSLDQLKP 143

Query: 151 PRFDPTQPQVMLGVDLARNLSVGVGDWVTLL----ATTADGALNALD-FQVRGLYSTGVP 205
             F      V++G+   R   + +GD +TL+    ++T  G    +    V G++  G  
Sbjct: 144 GEFG-----VIIGLMTVRRFGLKLGDKLTLIVPEVSSTPGGVTPRMQRLNVVGVFKVGA- 197

Query: 206 ELDKRQLYLHLASAQELLNSSKVSTLSVYLFNTENTQTLQTWVENQLNQLSLSQELQVTP 265
           +LD     +H A A +           ++ +  E  Q     V  +L+ L  + E+    
Sbjct: 198 DLDGSLGMIHRADAAQ-----------IHRWAPEQVQ----GVRLKLSDLYRAPEVAAQV 242

Query: 266 WQQLAFFYTRVKD---LYDRLFGVM-------GTVMAMVVFVALFN---TLTMSVSERTR 312
              L   Y RV+D       LF  M       G ++ ++V VA FN   TL M V+++  
Sbjct: 243 GATLGDGY-RVEDWSYTQGSLFSAMKMEKTMIGLLLMLIVAVAAFNIIATLIMVVADKRA 301

Query: 313 EIGTLSALGAYPSDILAGFVREATLLALCGSLLGTLLTGITIVAVRVADIQMPPPPGRTE 372
           +I  L  LGA P  I+A F+ + +++   G+++G +L  +  + V      +    G+  
Sbjct: 302 DIAILRTLGATPRQIMAIFMVQGSIIGFSGTVIGVVLGVLGALNVSELVNWLEKVSGQ-H 360

Query: 373 GYPLDLYFSFTLVGFCTLGTVLICVLAA 400
            +  D+YF  TL     L  V++  +AA
Sbjct: 361 IFSSDVYFISTLPSELRLEDVVLVSVAA 388