Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., lipoprotein releasing system transmembrane protein LolE (RefSeq) from Shewanella amazonensis SB2B

 Score = 67.0 bits (162), Expect = 1e-15
 Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 39/292 (13%)

Query: 150 SPRFDPT---QPQVMLGVDLARNLSVGVGDWVTLLATTADGAL--------NALDFQVRG 198
           SP FD     + +++LGV LA  L V VGD + +L  + +G +        +   F V G
Sbjct: 135 SPAFDSLISGEYRIILGVQLASELDVAVGDTIRVL--SGEGVVFSPLGPVPSQRKFIVSG 192

Query: 199 LYSTGVPELDKRQLYLHLASAQELLNSS--KVSTLSVYLFNTENTQTLQTWVENQLNQLS 256
           L+  G  ++D +  ++H   A+ L+  +  KV  L +YL +    +     V   L   +
Sbjct: 193 LFQMG-SQVDAQLAFIHYDDARRLMRKAPDKVDGLRLYLDDPFEAEATGKAVPQIL--AA 249

Query: 257 LSQELQVTPWQQLAFFYTRVKDLYDRLFGVM-------GTVMAMVVFVALFN---TLTMS 306
               L V  W          +D Y  LFG +         +++++V VA FN    L M 
Sbjct: 250 EGDTLNVHDW----------RDGYGHLFGAVKMEKNMTSLMLSLIVAVAAFNIVSALVMM 299

Query: 307 VSERTREIGTLSALGAYPSDILAGFVREATLLALCGSLLGTLLTGITIVAVRVADIQMPP 366
           V ++T ++  L   G   S ++  FV + +L AL G +LG L+ G+ +       +    
Sbjct: 300 VVDKTTDVAVLMTQGLTRSAVMGIFVTQGSLNALLGLVLG-LIAGLVLTLNLNPLLSALG 358

Query: 367 PPGRTEGYPLDLYFSFTLVGFCTLGTVLICVLAAWFSARKGVNKPITEALAY 418
                 G PL +  +   +    +GTV I +LA  + A +        AL Y
Sbjct: 359 IAVLGAGQPLPVIIAAEQLWLIVIGTVAITLLATLYPALRASRVEPASALRY 410