Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., Protein of unknown function DUF214 (NCBI) from Rhodospirillum rubrum S1H

 Score = 58.5 bits (140), Expect = 3e-13
 Identities = 84/332 (25%), Positives = 142/332 (42%), Gaps = 32/332 (9%)

Query: 23  SLLSISIIAIAVLALTSAGGFGLYTYDSLRESTA-RDVG-HLTLSQRGYFAQEEETPLAN 80
           +L S+++ A  V ALTS     LY   S++ S   R  G +  ++     A+    P   
Sbjct: 31  ALASLAVGAAVVSALTS-----LYLDISIKMSEELRAFGANFMVAPLAGEAEAGAPPTVR 85

Query: 81  GLEGSDHIRQVLLANPAIRGIQPRIELTGLVSNGQKSTIFVGLGVDDKEFDMKGPFLDLR 140
           G+  ++ +   + + PA R +     L GLV     + + VG  VD        P+  + 
Sbjct: 86  GM-ATERLEAAIASVPADRLVGASPYLYGLVRLDLGNAVMVG--VDFPGLRRLSPYWQVE 142

Query: 141 AGQTLQDPKSPRFDPTQPQVMLGVDLARNLSVGVGDWVTLLATTADGALNALDFQVRGLY 200
                       FD      M+G  LA ++++ VGD VTLL   A+G    +   ++G+ 
Sbjct: 143 GSWI-----GVAFDDRN--AMIGRRLAESMALKVGDGVTLL-NRAEGQQTRVT--IKGII 192

Query: 201 STGVPELDKRQLYLHLASAQELLN---SSKVSTLSVYLFNTENTQTLQTWVENQLNQLSL 257
             G  E D  Q+++ L  AQ LL     +  + LSV     E      T           
Sbjct: 193 DAGDQEDD--QIFVALPLAQRLLGLAGRADFAMLSVVAQGPEADALAATMTRE------- 243

Query: 258 SQELQVTPWQQLAFFYTRVKDLYDRLFGVMGTVMAMVVFVALFNTLTMSVSERTREIGTL 317
             ++   P ++++    ++    D L  ++   + ++  + +  TLT  V+ RT EIG  
Sbjct: 244 FPDVSARPIRKISQSDGQILGKIDGLMALVAATILVITTLCVNATLTAMVARRTPEIGLQ 303

Query: 318 SALGAYPSDILAGFVREATLLALCGSLLGTLL 349
            ALGA    I+A  + E TL+ L G +LG ++
Sbjct: 304 KALGADNRAIVAQVLAETTLICLVGVVLGLVI 335