Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., Lipoprotein releasing system, transmembrane protein, LolC/E family (NCBI) from Rhodospirillum rubrum S1H

 Score = 60.1 bits (144), Expect = 1e-13
 Identities = 64/275 (23%), Positives = 127/275 (46%), Gaps = 25/275 (9%)

Query: 86  DHIRQVLLANPAIRGIQPRIELTGLVSNGQKSTIFVGLGVDDKEFDMKGPFLDLRAGQTL 145
           D    ++   P +R + P +E   ++++  +S   +  GV  ++   +    +     +L
Sbjct: 80  DRATDIIRGIPGVRAVTPTVEGQVMLTDNGRSVGGLVRGVRPEDLRQRPMLANAVIAGSL 139

Query: 146 QDPKSPRFDPTQPQVMLGVDLARNLSVGVGDWVTLLA----TTADGALNALD-FQVRGLY 200
            D +       Q  +M+G  LA N  + VGD +TL++     TA G +  +  + VR ++
Sbjct: 140 DDLRG------QDSIMIGNRLAENFGLRVGDKLTLVSPKGKVTAMGTVPRVRAYTVRVIF 193

Query: 201 STGVPELDKRQLYLHLASAQELLN--SSKVSTLSVYLFNTENTQTLQTWVENQLNQLSLS 258
           S G+ E D   ++L L +AQ      +  V+ L V + + +    +   + +  N L   
Sbjct: 194 SIGMSEYDSSFVFLPLEAAQTYFQVPTEGVNHLEVVVDHPDRVGEVAGTIAST-NGLG-- 250

Query: 259 QELQVTPWQQL-AFFYTRVKDLYDRLFGVMGTVMAMVVFVALFNTLT---MSVSERTREI 314
             +++  W+Q  A F+  ++   +R   VM  ++ +++ VA FN ++   M V ++ R+I
Sbjct: 251 -GIRLRDWRQTNATFFNALQ--VER--NVMFLILTLIIVVAAFNIISGLIMLVKDKGRDI 305

Query: 315 GTLSALGAYPSDILAGFVREATLLALCGSLLGTLL 349
             L  +GA    I+  F      + + G+L G LL
Sbjct: 306 AILRTMGASRGAIMRIFFLAGAAVGVTGTLAGLLL 340