Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., ABC-type transport system, involved in lipoprotein release, permease component from Dechlorosoma suillum PS

 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 29/301 (9%)

Query: 129 EFDMKGPFLDLRAGQTLQDPKSPRFDPTQPQVMLGVDLARNLSVGVGDWVTLLATTADGA 188
           +F +   +L+L     L D +   F   +   ++G  LA      VGD V L  T   G 
Sbjct: 104 QFAVDPNYLELYPEYLLSDDERTAFARDRKGAVVGRKLAAQYGFKVGDVVQLKGTIFPGT 163

Query: 189 LNALDFQVRGLYSTGVPELDKRQLYLH------LASAQELLNSSKVSTLSVYLFNTENTQ 242
               +F +RG+Y+    + D  Q+  H      +A  +     ++V    V + +     
Sbjct: 164 W---EFVIRGIYTGRDAKTDVAQMLFHWDYLNEVAKVRYPRRQNQVGVYVVTIDDPGRAA 220

Query: 243 TLQTWVENQLNQLSLSQELQVTPWQQLAFFYTRVKDLYDRLFGVMGTVMAMVVFVALFNT 302
            L   ++ +    +     +     QL+F    + +       ++  V+  ++   + NT
Sbjct: 221 ELSRLIDAEFRNSAAETLTETEKAFQLSF--VSMTEAIVVAIRIVSYVVIAIILAVMANT 278

Query: 303 LTMSVSERTREIGTLSALGAYPSDILAGFVREATLLALCGSLLGTLLTGITIVAVRVADI 362
           + M+V ERT E  TL ALG  P  +      E+  +A  G  LG  LT     A      
Sbjct: 279 MAMTVRERTSEYATLKALGFGPGFVQGLIFGESVAIAAIGGGLGIALTFPAAAAF----- 333

Query: 363 QMPPPPGRTEGYPLDLYF----SFTLVGFCTLGTVLICVLAAWFSARKGVNKPITEALAY 418
                  +  G    ++F    +  L   C LG  LI   AAWF +R+    PI E L  
Sbjct: 334 ------AQAMGTLFPIFFVSGTTVLLQAACALGVGLI---AAWFPSRRAARIPIVEGLRS 384

Query: 419 V 419
           V
Sbjct: 385 V 385