Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 26/254 (10%)

Query: 161 MLGVDLARNL---SVGVGDWVTLLATTADGALNALDFQVRG-LYSTGVPELDKRQLYLHL 216
           M+G  LA N     + +GD +T+         N   ++V G L  TG P  +   + L  
Sbjct: 151 MIGYALATNSFDREIDIGDKITI---------NDKKYKVIGILEETGNPRTED-SVILSK 200

Query: 217 ASAQELLN-SSKVSTLSVYLFNTENTQTLQTWVENQLNQLSLSQELQVTPWQQLAFFYTR 275
              +EL   + + + + V + + E+   +   +E++L      +   V   +QLA     
Sbjct: 201 DVGEELFEINDEYNMMIVSVRSGEDVNKVSEDIEDELEDSRGDENFSVLTAEQLAESINS 260

Query: 276 VKDLYDR-LFGVMGTVMAMVVFVALFNTLTMSVSERTREIGTLSALGAYPSDILAGFVRE 334
           + ++    L GV G +  +V  V + NT+ MS+ ER ++IG L ALGA  + IL+ FV E
Sbjct: 261 IFEVLTIFLVGVAG-ISLLVGAVGISNTMHMSILERRKDIGILKALGAENNTILSIFVVE 319

Query: 335 ATLLALCGSLLGTLLTGITIVAVRVADIQMPPPPGRTEGYPL-DLYFSFTLVGFCTLGTV 393
           A  L L G ++GT+L  +   A+               GY L   + S+ L+    + + 
Sbjct: 320 AGFLGLFGGIIGTILGILIAKAIEYI--------AAISGYGLIRAWISWELIVGVLVFSF 371

Query: 394 LICVLAAWFSARKG 407
           ++ +L+ +F AR G
Sbjct: 372 VVGILSGYFPARSG 385