Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., ABC transporter, ATP-binding/permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.7 bits (143), Expect = 3e-13
 Identities = 44/135 (32%), Positives = 61/135 (45%), Gaps = 12/135 (8%)

Query: 283 LFGVMGTVMAMVVFVALFNTLTMSVSERTREIGTLSALGAYPSDILAGFVREATLLALCG 342
           L   +  +  +V  + + N + +SV+ERTREIG   A+GA  SDIL  F+ EA L+ LCG
Sbjct: 532 LISAIAVISLVVGGIGVMNIMLVSVTERTREIGVRMAVGARQSDILRQFLIEAVLVCLCG 591

Query: 343 SLLGTLLTGITIVAVRVADIQMPPPPGRTEGYPLDLYFSFTLVGFCTLGTVLICVLAAWF 402
             LG  L  +  V    A            G    + +S T +      + LI VL  + 
Sbjct: 592 GALGVALAYLIGVVFAQA------------GGSFQMIYSTTSIVAAFACSTLIGVLFGFL 639

Query: 403 SARKGVNKPITEALA 417
            AR        EALA
Sbjct: 640 PARNAARLDPVEALA 654