Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., lipoprotein transporter subunit LolE from Klebsiella michiganensis M5al

 Score = 64.7 bits (156), Expect = 5e-15
 Identities = 101/423 (23%), Positives = 170/423 (40%), Gaps = 56/423 (13%)

Query: 11  LAALNLQRNRRR----SLLSISI-------IAIAVLALTSAGGFGLYTYDSLRESTARDV 59
           L AL   R RRR    SL+S+         +A+ ++ L++  GF        RE   R +
Sbjct: 8   LIALRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFE-------RELNNRIL 60

Query: 60  GHLTLSQRGYFAQEEETPLANGLEGSDHIRQVLLANPAIRGIQPRIELTGLVSNGQKSTI 119
             +   +     +    P  N  E    + +V      I    P I  TGLV +G     
Sbjct: 61  AVVPHGE----IEPVNQPWNNWNEALAKVEKV----KGIVAAAPYINFTGLVESGSNMRA 112

Query: 120 FVGLGVDDKEFDMKGPFLDLRAGQTLQDPKSPRFDPTQPQVMLGVDLARNLSVGVGDWVT 179
               GVD ++        +      +Q+     F   + QV+LG  +A  L V  GDWV+
Sbjct: 113 IQVKGVDPQQESRLSSLPNF-----VQNNAWASFKAGEQQVILGKGVADALHVKQGDWVS 167

Query: 180 LLATTADGALNALDFQVRGLYSTGV----PELDKRQLYLHLASAQELLN-SSKVSTLSVY 234
           ++   +D     L  +   L+ TG+     +LD     + +  AQ+ L   S V+ +++ 
Sbjct: 168 IMIPNSDADHQLLQPKRVRLHVTGILQLSGQLDHSFAMIPIQDAQQYLEMGSSVTGIAIK 227

Query: 235 LFNTENTQTLQTWVENQLNQLSLSQELQVTPWQQLAFFYTRVKDLYDRLFGVMGTVMAMV 294
           + +  +  TL        N       + +  W  +  +    +D+   +  +M   M +V
Sbjct: 228 VTDVFHANTLVRDAGEVTNSY-----VYIKSW--IGTYGYMYRDI-QMIRAIMYLAMVLV 279

Query: 295 VFVALFN---TLTMSVSERTREIGTLSALGAYPSDILAGFVREATLLALCGSLLGTLLTG 351
           + VA FN   TL M+V +++ +I  L  LGA    I A FV    L    GSL+G  + G
Sbjct: 280 IGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGSVGSLIGVAI-G 338

Query: 352 ITIVAVRVADIQMPPPPGRTEGYPLDLYFSFTL--------VGFCTLGTVLICVLAAWFS 403
           +       A I         +    D+YF   L        V +  +  +L+ +LA+W+ 
Sbjct: 339 VICAFKLTAIINGIENLIGHKFLSGDIYFIDFLPSELHWLDVVYVLVTALLLSLLASWYP 398

Query: 404 ARK 406
           AR+
Sbjct: 399 ARR 401