Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., lipoprotein releasing system, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 68.9 bits (167), Expect = 3e-16
 Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 24/272 (8%)

Query: 160 VMLGVDLARNLSVGVGDWVTLLA-----TTADGALNALDFQVRGLYSTGVPELDKRQLYL 214
           +++G +LA  L +  G  V LL+     TT   A     F+V G+++TG+ E D    ++
Sbjct: 150 IIIGQELANRLGITTGSRVNLLSPDGQKTTTGFAPRIRPFRVAGIFTTGMYEYDSSLGFV 209

Query: 215 HLASAQELLN--SSKVSTLSVYLFNTENTQTLQTWVENQLNQLSLSQELQVTPWQQL-AF 271
            L +A+++L     +VS + V + +          +   + + S      V  W ++ A 
Sbjct: 210 TLDAARDILGLPEGQVSGIEVVVDDVYKADV----IGEDVLKASGGYPYYVRNWMEMNAN 265

Query: 272 FYTRVKDLYDRLFGVMGTVMAMVVFVALFN---TLTMSVSERTREIGTLSALGAYPSDIL 328
            +  +K     +F     ++A++V V  F+   TL M V E+TR+I  L ++GA  S + 
Sbjct: 266 LFAALKLEKTAMF----VILALIVLVGSFSIVTTLVMLVMEKTRDIAILMSMGATRSMVR 321

Query: 329 AGFVREATLLALCGSLLGTLL-TGITIVAVRVADIQMPPPPGRTEGYPLDLYFS-FTLVG 386
             F+ + T++   G+ LG +L   ++    R   I++P      +  P+ L +S    VG
Sbjct: 322 RIFMLQGTIIGAIGTALGYVLGLSVSWALQRYQFIKLPQGVYSIDHLPVLLQWSDLAAVG 381

Query: 387 FCTLGTVLICVLAAWFSARKGVNKPITEALAY 418
              +   L+C LA  + AR+       EAL Y
Sbjct: 382 GAAM---LLCFLATIYPARQAAALEPVEALRY 410