Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., ABC-type transport system involved in lipoprotein release, permease component LolE from Caulobacter crescentus NA1000

 Score = 60.8 bits (146), Expect = 7e-14
 Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 32/263 (12%)

Query: 91  VLLANPAIRGIQPRIELTGLVSNGQKSTIFVGLGVDDKEFDMKGPFLDLRAGQTLQDPKS 150
           +L ANP +  I P+I  +  +   +       LGV+ +  D        R    + +   
Sbjct: 99  LLRANPEVSAISPQISGSAFLVRSEAVAPVAVLGVEPQGIDAIS-----RITPNIIEGDG 153

Query: 151 PRFDPTQPQVMLGVDLARNLSVGVGDWVTLLATTADGALNALDFQVRGLYSTGVPELDKR 210
              D     +++GV +A  L +G G   ++L  T  G    L   VRG++ TG+  LD+R
Sbjct: 154 ---DLGANGLLIGVRMAEELGLGAGQ--SVLLRTERGVERQLT--VRGVFRTGLQSLDER 206

Query: 211 QLYLHLASAQELLNSSK-VSTLSVYLFNTENTQTLQTWVENQLNQLSLSQELQVTPWQQL 269
             +L L +A+ L +  + V+ + V L + ++ +    +       L  +  L+ TPWQ+ 
Sbjct: 207 VAFLSLQTARPLFDLPEGVTNIEVKLKDPQDARATARF-------LGEATGLRATPWQE- 258

Query: 270 AFFYTRVKDLYDRL-----FGVMGTVMAMV-VFVALFNTLTMSVSERTREIGTLSALGAY 323
                +   L D L      G M  + +++ + + + + L +S   R  E+G + A G  
Sbjct: 259 -----KNVGLEDALKAQGQTGTMIQIFSLISIIIGVASALVLSAYRRRSEVGIMRAFGVP 313

Query: 324 PSDILAGFVREATLLALCGSLLG 346
              IL  F+ +  L+ L G+L+G
Sbjct: 314 GGFILWVFLLQGLLIGLVGALIG 336