Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score = 62.8 bits (151), Expect = 3e-14
 Identities = 105/440 (23%), Positives = 170/440 (38%), Gaps = 72/440 (16%)

Query: 6   SQAWRLAALNLQRNRRRSLLSISIIAIAVLALTSAGGFGLYTYDSLRESTARDVGHLTLS 65
           ++A ++A L +  +R R+ L++  I I + ++ S    G  +   + +S +  +G  T+ 
Sbjct: 259 AEALKMALLAMSTHRLRTFLTMLGIIIGIASVVSVVALGEGSQREILKSIS-SMGTNTID 317

Query: 66  QR-GYFAQEEETPLANGLEGSDHIRQVLLANPAIRGIQPRIELTGLVSNGQKSTIFVGLG 124
            R G    +  +     L  SD     L   P +  + P I  +  V  G K+      G
Sbjct: 318 IRPGSGFGDRRSARVRTLTASD--ANALKNLPYVDSVTPSIGSSATVRYGNKAVTATVNG 375

Query: 125 VDDKEFDMKGPFLDLRAGQTLQDPKSPRF-------DPTQPQVMLGVDLARNLSVG---- 173
           V  + F ++G   +L  GQ   D             + T+ Q+      A N ++G    
Sbjct: 376 VGPEFFRVRG--YELAQGQFWDDDSVNALAQDAVIDENTRKQLFPNSSGAMNSAIGEVIF 433

Query: 174 VGDW------VTLLATTADGALNALDFQVRGLYST------GVPELDKRQLYLHLASAQE 221
           +GD       VT    +A G  +AL+  V   Y+T      G   LD   + L  +    
Sbjct: 434 LGDLPVRIIGVTQPKESAFGNSDALNVWVP--YTTVSGRMVGKKYLDGITVRLDESVPSN 491

Query: 222 LLNSSKVSTLSVYL----FNTENTQTLQTWVENQLNQLSLSQELQVTPWQQLAFFYTRVK 277
                 +S L +      F T NT T++  +E     ++L                    
Sbjct: 492 AAEQGIISLLKMRHGTQDFFTINTDTIRQNIEKTTATMTL-------------------- 531

Query: 278 DLYDRLFGVMGTVMAMVVFVALFNTLTMSVSERTREIGTLSALGAYPSDILAGFVREATL 337
                L   +  +  +V  + + N + +SV+ERTREIG   A+GA  SDIL  F+ EA L
Sbjct: 532 -----LISAIAVISLVVGGIGVMNIMLVSVTERTREIGVRMAVGARQSDILRQFLIEAVL 586

Query: 338 LALCGSLLGTLLTGITIVAVRVADIQMPPPPGRTEGYPLDLYFSFTLVGFCTLGTVLICV 397
           + LCG  LG  L  +  V    A            G    + +S T +      + LI V
Sbjct: 587 VCLCGGALGVALAYLIGVVFAQA------------GGSFQMIYSTTSIVAAFACSTLIGV 634

Query: 398 LAAWFSARKGVNKPITEALA 417
           L  +  AR        +ALA
Sbjct: 635 LFGFLPARNAARLDPVDALA 654