Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., LolC/E family lipoprotein releasing system, transmembrane protein (RefSeq) from Shewanella sp. ANA-3

 Score = 67.4 bits (163), Expect = 8e-16
 Identities = 86/367 (23%), Positives = 149/367 (40%), Gaps = 51/367 (13%)

Query: 75  ETPLANGLEGSDHIRQVLLANPAIRGIQPRIELTGLVSNGQKSTIFVGLGVDDKEFDMKG 134
           E PL++    +D ++    A P ++G+ P +    +V +          GV         
Sbjct: 71  EAPLSDWTIPADKLK----ALPGVQGVTPSVSTQAMVQSAANIRAVQVFGVF-------- 118

Query: 135 PFLDLRAGQTLQDPKSPRFDPT---QPQVMLGVDLARNLSVGVGDWVTLLATTADGAL-- 189
           P L  +     Q   S  F+     Q +V+LG +LAR L V  GD V LL  + DG +  
Sbjct: 119 PELAEKLSMVAQHTYSGAFNELTSGQYKVILGSELARQLKVSPGDTVRLL--SGDGVVYS 176

Query: 190 ------NALDFQVRGLYSTGVPELDKRQLYLHLASAQELLN--SSKVSTLSVYLFNTENT 241
                 +   F V  ++  G  ++D    Y+H   A+ L+   S +++ L +YL +    
Sbjct: 177 PLGPVPSQRKFLVSAVFEMG-SQVDAGVAYIHYQDAKRLMRQPSDEINQLRLYLSDPFMA 235

Query: 242 QTLQTWVENQLNQLSLSQELQVTPWQQLAFFYTRVKDLYDRLF-------GVMGTVMAMV 294
             L   V+  L Q  +  E   + W          +D Y  LF        +M  +++++
Sbjct: 236 PALAKDVKQVLTQQGI--EATTSDW----------RDTYGHLFSAVKMEKNMMSLMLSLI 283

Query: 295 VFVALFN---TLTMSVSERTREIGTLSALGAYPSDILAGFVREATLLALCGSLLGTLLTG 351
           V VA FN    L M V ++T ++  L   G   S ++  FV +  L A+ G +LG L+ G
Sbjct: 284 VAVAAFNIVSALVMMVVDKTTDVAVLKTQGLRTSAVMGIFVVQGLLNAVLGLVLG-LVVG 342

Query: 352 ITIVAVRVADIQMPPPPGRTEGYPLDLYFSFTLVGFCTLGTVLICVLAAWFSARKGVNKP 411
           I +       +          G  L +      +    +GT+++ ++A  + A +     
Sbjct: 343 ILLTLNLNGIMATLGISILGTGQVLPVKLELGQLSMIIVGTLVVTLVATLYPALRAARVQ 402

Query: 412 ITEALAY 418
              AL Y
Sbjct: 403 PATALRY 409