Pairwise Alignments

Query, 359 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., Predicted signal transduction protein with a C-terminal ATPase domain from Pseudomonas stutzeri RCH2

 Score =  113 bits (282), Expect = 9e-30
 Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 17/227 (7%)

Query: 98  EFSAYKPIIFLGFIFSAVCFLYFYSHEQKILAQGALEAARRRQSEQEKALLLSQLKQLQS 157
           E + Y     +  I S +   YFY           L++  RRQ   E+A L ++++ LQ+
Sbjct: 116 EVNLYLRHALISLIMSGLLLRYFY-----------LQSQWRRQ---EQAELRARIESLQA 161

Query: 158 QMEPHFLFNTLANINALIAVEPYKAQLMLEKLTELLRGTMRLRRTNTGDLREEMQLIDAY 217
           ++ PHFLFN+L +I AL+A +P KA+  +  L++L R ++    T      EE++L   Y
Sbjct: 162 RIRPHFLFNSLNSIAALVASDPVKAEQAVLDLSDLFRASLARPGTLVA-WSEELELSRRY 220

Query: 218 LGIQKIRLGERLEYTLPELSELGTLGMPPMLIQPLVENAVSHGIEPKAEGGTIRVRIEVA 277
           L I++ RLG+RL+           L +P + +QPL+ENA+ +GI+P+ EGG + V  +  
Sbjct: 221 LSIEQYRLGDRLQMDWQVDGVPDDLPIPQLTLQPLLENALVYGIQPRIEGGVVSVTADYV 280

Query: 278 DDWFELSVED--NGMGLSDTPKGNGIALQNVRDRLSGLFGHEGLLTV 322
           D  F+L V +  + +  +   +G    LQN+  RL+ LFG    L+V
Sbjct: 281 DGTFQLVVSNPFDEVAQTQASRGTRQGLQNIDARLAALFGPLASLSV 327