Pairwise Alignments

Query, 359 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., signal transduction histidine kinase, LytS (RefSeq) from Shewanella loihica PV-4

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 68/188 (36%), Positives = 101/188 (53%), Gaps = 12/188 (6%)

Query: 139 RQSEQEKALLLSQLKQLQSQMEPHFLFNTLANINALIAVEPYKAQLMLEKLTELLRGTMR 198
           R   Q+  L  ++LK LQ+Q+ PHFLFN L  I A+I  +P  A+ +L+ L++ LR  ++
Sbjct: 355 RYELQQSLLTQAELKLLQAQVNPHFLFNALNTIAAIIGKDPLMARQLLQHLSQFLRINLK 414

Query: 199 LRRTNTGDLREEMQLIDAYLGIQKIRLGERLEYTLPELSELGTLGMPPMLIQPLVENAVS 258
            R T    L +E++ IDAYL I+K R  ++L   +   + L    +P   +QP++ENAV 
Sbjct: 415 -RTTGLVTLSDELEHIDAYLTIEKARFIDKLSVHIDIPATLHQYRLPAFTLQPIIENAVK 473

Query: 259 HGIEPKAEGGTIRVRIEVADDWFELSVEDNGMGL------SDTPKGNGIALQNVRDRLSG 312
           HG     E G I V      D   L V+DN  GL      +DT   +G+ +  V  R+  
Sbjct: 474 HGTSHLLEPGEIWVSGRAEQDLLILEVKDNA-GLYREELNADT---SGLGMSIVHKRIQS 529

Query: 313 LFG-HEGL 319
           LFG H G+
Sbjct: 530 LFGPHYGV 537