Pairwise Alignments

Query, 359 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 1/179 (0%)

Query: 139 RQSEQEKALLLSQLKQLQSQMEPHFLFNTLANINALIAVEPYKAQLMLEKLTELLRGTMR 198
           R  +Q+  L  ++LK LQ+Q+ PHFLFN L  I+A+I  +P  ++ +L++L++ LR  ++
Sbjct: 355 RFEQQQNLLTQAELKLLQAQVNPHFLFNALNTISAIIKRDPDMSKQLLQQLSQFLRINLK 414

Query: 199 LRRTNTGDLREEMQLIDAYLGIQKIRLGERLEYTLPELSELGTLGMPPMLIQPLVENAVS 258
            R T    L +E+  I +YL I+K R   +L+  +     L    +P   +QP++ENAV 
Sbjct: 415 -RTTGLVTLGDELDHIASYLTIEKARFINKLQVNIAIPESLYHCKVPAFTLQPIIENAVK 473

Query: 259 HGIEPKAEGGTIRVRIEVADDWFELSVEDNGMGLSDTPKGNGIALQNVRDRLSGLFGHE 317
           HG     + G I+V   + +    L V DN      +    G+ +  V  R+  LFG +
Sbjct: 474 HGTSHMIDQGQIKVTGRLDEHVLALEVIDNAGLYQPSTDSEGLGMNLVHKRIQNLFGEQ 532