Pairwise Alignments

Query, 359 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 571 a.a., regulatory protein LytS (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  106 bits (264), Expect = 2e-27
 Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 13/206 (6%)

Query: 143 QEKALLLSQLKQLQSQMEPHFLFNTLANINALIAVEPYKAQLMLEKLTELLRGTMRLRRT 202
           + + L  +++++LQ+Q+ PHFLFN+L  + +     P +A+ ++  L   +R  +   R 
Sbjct: 353 KNQLLARAEIRRLQAQINPHFLFNSLNTVASFCRTAPGQARELILDLARYMRRNLDTSRE 412

Query: 203 NTGDLREEMQLIDAYLGIQKIRLGERLEYTLPELSELGTLGMPPMLIQPLVENAVSHGIE 262
               L EE++ I AYL I+K R GER+   +    E     +PP+LIQPLVEN+V HGI 
Sbjct: 413 AI-HLAEEVEQIRAYLVIEKARFGERIRAVIDIDPETEHCLVPPLLIQPLVENSVRHGIL 471

Query: 263 PKAEGGTIRVRIEVADDWFELSVEDNGMGLSD------------TPKGNGIALQNVRDRL 310
              EGG +R+   + D    + VED+G G+ +            T  G GI   N   RL
Sbjct: 472 GNEEGGVVRLATSMEDGHVVVVVEDDGAGMPESTRQGILNGTPVTAHGEGIGASNCNQRL 531

Query: 311 SGLFGHEGLLTVAQNCSGGVTATLRI 336
             L+G    L++      G   T R+
Sbjct: 532 VQLYGPAYALSIDSAPGMGTRITFRV 557