Pairwise Alignments

Query, 359 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., signal transduction histidine kinase, LytS (RefSeq) from Shewanella sp. ANA-3

 Score = 97.4 bits (241), Expect = 8e-25
 Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 1/179 (0%)

Query: 139 RQSEQEKALLLSQLKQLQSQMEPHFLFNTLANINALIAVEPYKAQLMLEKLTELLRGTMR 198
           R  +Q+  L  ++LK LQ+Q+ PHFLFN L  I+A+I  +P  ++ +L++L++ LR  ++
Sbjct: 355 RFEQQQNLLTQAELKLLQAQVNPHFLFNALNTISAIIKRDPDMSKQLLQQLSQFLRINLK 414

Query: 199 LRRTNTGDLREEMQLIDAYLGIQKIRLGERLEYTLPELSELGTLGMPPMLIQPLVENAVS 258
            R T    L +E+  I +YL I+K R  ++L+  +     L    +P   +QP++ENAV 
Sbjct: 415 -RTTGLVTLGDELDHIASYLTIEKARFIDKLQVNIAIPESLYHCKVPAFTLQPIIENAVK 473

Query: 259 HGIEPKAEGGTIRVRIEVADDWFELSVEDNGMGLSDTPKGNGIALQNVRDRLSGLFGHE 317
           HG     E G I+V   + +    L V DN           G+ +  V  R+  LFG +
Sbjct: 474 HGTSHMIEQGQIKVTGRMDEQILVLEVTDNAGLYQPIIGSEGLGMNLVHKRIQNLFGEQ 532